RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CRABP1P29762 137 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 HTR5AP47898 357 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 HMGA2P52926 109 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 PPP1R8Q12972 351 aaKnown RBP19.34■□□□□ 0.69
CCDC9-204ENST00000599398 AQP6Q13520 282 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 MOGQ16653 247 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 ARL9Q6T311 187 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 ZNF620Q6ZNG0 422 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 LINC00471Q8N535 108 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 OR4K13Q8NH42 304 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 SLC25A40Q8TBP6 338 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 ASB9Q96DX5 294 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 C4orf45Q96LM5 186 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 NMNAT3Q96T66 252 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 TRIM15Q9C019 465 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 ELOVL3Q9HB03 270 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 SRA1Q9HD15 236 aaKnown RBP19.34■□□□□ 0.69
CCDC9-204ENST00000599398 HINT3Q9NQE9 182 aaKnown RBP19.34■□□□□ 0.69
CCDC9-204ENST00000599398 PLEK2Q9NYT0 353 aa19.34■□□□□ 0.69
CCDC9-204ENST00000599398 MALRD1Q5VYJ5 2156 aa19.33■□□□□ 0.69
CCDC9-204ENST00000599398 ARPC3O15145 178 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 CCNB2O95067 398 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 GPANK1O95872 356 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 MT-ND5P03915 603 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 HIST1H1CP16403 213 aaKnown RBP19.33■□□□□ 0.68
CCDC9-204ENST00000599398 ZNF16P17020 682 aaPredicted RBP19.33■□□□□ 0.68
CCDC9-204ENST00000599398 GZMKP49863 264 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 PPP1CBP62140 327 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 LSM6P62312 80 aaKnown RBP19.33■□□□□ 0.68
CCDC9-204ENST00000599398 CLEC12AQ5QGZ9 265 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 ELFN2Q5R3F8 820 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 RFPL4BQ6ZWI9 263 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 OR52L1Q8NGH7 329 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 BTBD10Q9BSF8 475 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 OR2J1Q9GZK6 312 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 EGLN3Q9H6Z9 239 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 ASH2LQ9UBL3 628 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 U3KQV3 271 aa19.33■□□□□ 0.68
CCDC9-204ENST00000599398 C17orf100A8MU93 164 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 DCTN6O00399 190 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 ABHD16AO95870 558 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 NGFP01138 241 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 IGHV3-13P01766 116 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 COX5BP10606 129 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 ZNF23P17027 643 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 MPV17P39210 176 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 MAGEB1P43366 347 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 ARHGDIAP52565 204 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 SLC35F1Q5T1Q4 408 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 VASH1Q7L8A9 365 aaPredicted RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 C1orf174Q8IYL3 243 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 OR4C15Q8NGM1 316 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 IPCEF1Q8WWN9 437 aaPredicted RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 RDH5Q92781 318 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 POP5Q969H6 163 aaKnown RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 MARS2Q96GW9 593 aaKnown RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 REEP1Q9H902 201 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 RPRD1BQ9NQG5 326 aaKnown RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 SAMHD1Q9Y3Z3 626 aaKnown RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 CDH10Q9Y6N8 788 aa19.32■□□□□ 0.68
CCDC9-204ENST00000599398 ANK3Q12955 4377 aaKnown RBP19.32■□□□□ 0.68
CCDC9-204ENST00000599398 LRP5LA4QPB2 252 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 IDH3BO43837 385 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 NCR1O76036 304 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 UBOX5O94941 541 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 GASTP01350 101 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 COL8A2P25067 703 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 CHN2P52757 468 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 CCL8P80075 99 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 RIN1Q13671 783 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 MEP1BQ16820 701 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 OR2T5Q6IEZ7 315 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 RPL13AP3Q6NVV1 102 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 SDR9C7Q8NEX9 313 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 OR2T29Q8NH02 315 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 KLF14Q8TD94 323 aaPredicted RBP19.31■□□□□ 0.68
CCDC9-204ENST00000599398 GTF3AQ92664 365 aaKnown RBP19.31■□□□□ 0.68
CCDC9-204ENST00000599398 SNX18Q96RF0 628 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 FN3KQ9H479 309 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 CHODLQ9H9P2 273 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 B9D1Q9UPM9 204 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 GRIP1Q9Y3R0 1128 aa19.31■□□□□ 0.68
CCDC9-204ENST00000599398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.3■□□□□ 0.682e-6■■■□□ 15
CCDC9-204ENST00000599398 IGLV1-36A0A0B4J1U3 117 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 GYG2O15488 501 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 TPD52L2O43399 206 aaKnown RBP19.3■□□□□ 0.68
CCDC9-204ENST00000599398 DBPQ10586 325 aaPredicted RBP19.3■□□□□ 0.68
CCDC9-204ENST00000599398 PCGF3Q3KNV8 242 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 PGM2L1Q6PCE3 622 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 OR6V1Q8N148 313 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 AQP11Q8NBQ7 271 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 OR52E2Q8NGJ4 325 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 SLC7A6Q92536 515 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 VNN3Q9NY84 501 aa19.3■□□□□ 0.68
CCDC9-204ENST00000599398 LOC100289279A0A1B0GTE1 492 aa19.29■□□□□ 0.68
CCDC9-204ENST00000599398 PLSCR5A0PG75 271 aa19.29■□□□□ 0.68
CCDC9-204ENST00000599398 ACOT8O14734 319 aa19.29■□□□□ 0.68
CCDC9-204ENST00000599398 RER1O15258 196 aa19.29■□□□□ 0.68
CCDC9-204ENST00000599398 ICMTO60725 284 aa19.29■□□□□ 0.68
CCDC9-204ENST00000599398 RAP2AP10114 183 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms