RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 TESCQ96BS2 214 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 RAB39BQ96DA2 213 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 C3orf30Q96M34 536 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 OXGR1Q96P68 337 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ALKBH3Q96Q83 286 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 PANX1Q96RD7 426 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 INTS14Q96SY0 518 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZBTB18Q99592 522 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 SRSF8Q9BRL6 282 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TPK1Q9H3S4 243 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF385DQ9H6B1 395 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 YY1AP1Q9H869 796 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 NTN4Q9HB63 628 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 DDX28Q9NUL7 540 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 THUMPD1Q9NXG2 353 aaKnown RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 TREM2Q9NZC2 230 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 ZDHHC2Q9UIJ5 367 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 BTNL2Q9UIR0 455 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 POFUT2Q9Y2G5 429 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 IFT52Q9Y366 437 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 V9GYY5 206 aaPredicted RBP4.77□□□□□ -1.65
DNMT1-220ENST00000589351 DYSFO75923 2080 aa4.77□□□□□ -1.65
DNMT1-220ENST00000589351 A0A0G2JMP0 313 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 A0A0X1KG70 313 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 A0A1W2PPW3 197 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 XKRY2A2RUG3 117 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 CDHR4A6H8M9 788 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 GAGE10A6NGK3 116 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF726A6NNF4 738 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 HNRNPCL2B2RXH8 293 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LYNX1G3V0Z9 82 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 AIM2O14862 343 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 POLR3GO15318 223 aaPredicted RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 HNRNPCL1O60812 293 aaKnown RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 UPK3AO75631 287 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SEC14L2O76054 403 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ANP32DO95626 131 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 PTHP01270 115 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 GKN3PP0CG01 181 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LYNX1P0DP58 116 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LBPP18428 481 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 TCN1P20061 433 aaPredicted RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 GATA3P23771 443 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 COL8A2P25067 703 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 MDH1P40925 334 aaKnown RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 RPS5P46782 204 aaKnown RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 NME5P56597 212 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 CD83Q01151 205 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 IFFO1Q0D2I5 559 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 BNIP2Q12982 314 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 FHL3Q13643 280 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF273Q14593 569 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 MFSD13AQ14CX5 517 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 CEACAM16Q2WEN9 425 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 PCGF3Q3KNV8 242 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 AARDQ4LEZ3 155 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 AADACL4Q5VUY2 407 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 METTL11BQ5VVY1 283 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 MSANTD1Q6ZTZ1 278 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 HMGN2P46Q86SG4 172 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 MDP1Q86V88 176 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ANKRD46Q86W74 232 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 RNF130Q86XS8 419 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 NUDCD3Q8IVD9 361 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LRRC34Q8IZ02 419 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ELMOD2Q8IZ81 293 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 CDK20Q8IZL9 346 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ANKFN1Q8N957 763 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 TMEM116Q8NCL8 245 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 RBM15BQ8NDT2 890 aaKnown RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SEMA6DQ8NFY4 1073 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 OR4M2Q8NGB6 313 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 TCP10LQ8TDR4 215 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 RAB1CQ92928 201 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SLC38A4Q969I6 547 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SLC35B4Q969S0 331 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 MRPL24Q96A35 216 aaKnown RBP4.76□□□□□ -1.65
DNMT1-220ENST00000589351 TIMD4Q96H15 378 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LRR1Q96L50 414 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 CCDC115Q96NT0 180 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 GPA33Q99795 319 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 BCL7BQ9BQE9 202 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 RHOXF2Q9BQY4 288 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SLC38A1Q9H2H9 487 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 NARFLQ9H6Q4 476 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ZNF696Q9H7X3 374 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LPAR2Q9HBW0 351 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 NOX3Q9HBY0 568 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 GPR35Q9HC97 309 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 SLCO1C1Q9NYB5 712 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 P2RX2Q9UBL9 471 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 ZDHHC8Q9ULC8 765 aa4.76□□□□□ -1.65
DNMT1-220ENST00000589351 LOC102725191A0A1B0GVB3 256 aa4.75□□□□□ -1.65
DNMT1-220ENST00000589351 SH2D7A6NKC9 451 aaPredicted RBP4.75□□□□□ -1.65
DNMT1-220ENST00000589351 E9PBE3 544 aa4.75□□□□□ -1.65
DNMT1-220ENST00000589351 M0R3G1 203 aa4.75□□□□□ -1.65
DNMT1-220ENST00000589351 ANGPT2O15123 496 aa4.75□□□□□ -1.65
DNMT1-220ENST00000589351 BCAS1O75363 584 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms