RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 IPCEF1Q8WWN9 437 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 CCDC124Q96CT7 223 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 THTPAQ9BU02 230 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 OR2J1Q9GZK6 312 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 SYT4Q9H2B2 425 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 NRIP3Q9NQ35 241 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 CUBNO60494 3623 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 ABCA2Q9BZC7 2435 aa10.85□□□□□ -0.67
NPLOC4-213ENST00000573519 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 IMPA2O14732 288 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 SPRY3O43610 288 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 AHCYL1O43865 530 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 OR10H3O60404 316 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 KHDRBS3O75525 346 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ABHD16AO95870 558 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 NGFP01138 241 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 HTR5AP47898 357 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ZNF81P51508 661 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 TMEM33P57088 247 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 PPP1CBP62140 327 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 PPP1R8Q12972 351 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 TRIM25Q14258 630 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ARL9Q6T311 187 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 SYT9Q86SS6 491 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ARHGAP24Q8N264 748 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 CLDND2Q8NHS1 167 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 MARS2Q96GW9 593 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 C4orf45Q96LM5 186 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ERMAPQ96PL5 475 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 NUAK2Q9H093 628 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 ELOVL3Q9HB03 270 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 LPAR2Q9HBW0 351 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 NDRG4Q9ULP0 352 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 POLR1DQ9Y2S0 133 aa10.84□□□□□ -0.67
NPLOC4-213ENST00000573519 IGHV1-69-2A0A0G2JMI3 117 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 WNT9BO14905 357 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 PHF1O43189 567 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 SGCEO43556 437 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 RP2O75695 350 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 MPZL1O95297 269 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 CDH15P55291 814 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 MRPS11P82912 194 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 TEKQ02763 1124 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 MVKQ03426 396 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 AQP6Q13520 282 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 AVPI1Q5T686 147 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 LCN8Q6JVE9 175 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 PTCHD4Q6ZW05 846 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 USP51Q70EK9 711 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 ADCK1Q86TW2 530 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 JAZF1Q86VZ6 243 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 GPX7Q96SL4 187 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 WACQ9BTA9 647 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 IFT27Q9BW83 186 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 MUC13Q9H3R2 512 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 SAP30LQ9HAJ7 183 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 NKIRAS2Q9NYR9 191 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 TREM2Q9NZC2 230 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 VSX1Q9NZR4 365 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 ASH2LQ9UBL3 628 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 TMEFF2Q9UIK5 374 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 TMCC3Q9ULS5 477 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 PRPF19Q9UMS4 504 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 GRIP1Q9Y3R0 1128 aa10.83□□□□□ -0.68
NPLOC4-213ENST00000573519 ABCA1O95477 2261 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 B4DSR2 109 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 TNFRSF11BO00300 401 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 TIMM8AO60220 97 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 GPANK1O95872 356 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 IGHV1-46P01743 117 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 GSTM3P21266 225 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 NOS3P29474 1203 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 SLC6A6P31641 620 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 IFNGR2P38484 337 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 CDKN2AP42771 156 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 CRYBB2P43320 205 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 MMP15P51511 669 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 DBPQ10586 325 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 HFEQ30201 348 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 RFX4Q33E94 735 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 MTX3Q5HYI7 312 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 PGBD2Q6P3X8 592 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 LEG1Q6P5S2 330 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 C1orf174Q8IYL3 243 aa10.82□□□□□ -0.68
NPLOC4-213ENST00000573519 OR9Q2Q8NGE9 314 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms