RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TNK1Q13470 666 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-225ENST00000569245 KRR1Q13601 381 aaKnown RBP12.56□□□□□ -0.4
COMMD4-225ENST00000569245 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 MESTQ5EB52 335 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 NXNL2Q5VZ03 156 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 Q71RC1 249 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-225ENST00000569245 HDDC2Q7Z4H3 204 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 SYT14Q8NB59 555 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 SLC37A3Q8NCC5 494 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 OR4F15Q8NGB8 312 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 FBXO17Q96EF6 278 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 COX4I2Q96KJ9 171 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 SEC61A2Q9H9S3 476 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
COMMD4-225ENST00000569245 CLN6Q9NWW5 311 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 AASSQ9UDR5 926 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF503-AS2A6NEH8 195 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 VSTM5A8MXK1 200 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CENPBD1B2RD01 187 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PRR23D1E9PI22 279 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 XKRYO14609 159 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 AHCYL1O43865 530 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 ENTPD6O75354 484 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 RAB36O95755 333 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CCDC159P0C7I6 412 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PGA4P0DJD7 388 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PGA3P0DJD8 388 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PRR23D2P0DMB1 279 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CALCRP30988 508 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 SERPINF1P36955 418 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CDKN2AP42771 156 aaKnown RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CHN2P52757 468 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 NUDT6P53370 316 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CRMP1Q14194 572 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 C11orf71Q6IPW1 123 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CXXC5Q7LFL8 322 aaKnown RBP12.55□□□□□ -0.4
COMMD4-225ENST00000569245 JAZF1Q86VZ6 243 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CPOQ8IVL8 374 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 HTRA1Q92743 480 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PTP4A1Q93096 173 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 NMNAT2Q9BZQ4 307 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 CA10Q9NS85 328 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PLCXD1Q9NUJ7 323 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 ZFHX3Q15911 3703 aa12.55□□□□□ -0.4
COMMD4-225ENST00000569245 PRSS37A4D1T9 235 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 OR6C68A6NDL8 312 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SNTNA6NMZ2 147 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 PRODHO43272 600 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 DHHO43323 396 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 UBL3O95164 117 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 FARS2O95363 451 aaKnown RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 OR4A8P0C604 315 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 OR8G3PP0DMU2 310 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF84P51523 738 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SLC25A1P53007 311 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SNRPD2P62316 118 aaKnown RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 RAB1AP62820 205 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 RUNX1T1Q06455 604 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SMN1Q16637 294 aaKnown RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 LEG1Q6P5S2 330 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF627Q7L945 461 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 MYPOPQ86VE0 399 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 GID4Q8IVV7 300 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SKA3Q8IX90 412 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 SLC22A24Q8N4F4 322 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 MCHR2Q969V1 340 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 NMNAT3Q96T66 252 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ALG12Q9BV10 488 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-225ENST00000569245 MYRFQ9Y2G1 1151 aa12.54□□□□□ -0.4
COMMD4-225ENST00000569245 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 FAM183AA6NL82 134 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 SLC1A7O00341 560 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
COMMD4-225ENST00000569245 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 LY6G6DO95868 133 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 RENP00797 406 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 SLC2A5P22732 501 aa12.53□□□□□ -0.4
COMMD4-225ENST00000569245 FMO3P31513 532 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms