RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 HSPB2A8KAH6 182 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 TRAPPC6AO75865 159 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 TSPAN9O75954 239 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 WDPCPO95876 746 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 HRGP04196 525 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 EPXP11678 715 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ATF1P18846 271 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ENPP1P22413 925 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 APEX1P27695 318 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CDAP32320 146 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CLDN17P56750 224 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 RASGEF1BQ0VAM2 473 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 AIMP2Q13155 320 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 P2RY14Q15391 338 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 HSPB2Q16082 182 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 HIST3H3Q16695 136 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 Q499Y3 187 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 PYDC2Q56P42 97 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FDX2Q6P4F2 183 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 NOXA1Q86UR1 476 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 DTX1Q86Y01 620 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 PHYHIPQ92561 330 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ZFP64Q9NPA5 681 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FBXL3Q9UKT7 428 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 A0A1W2PPL8 197 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CDRT15L2A8MXV6 281 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 EIF1BO60739 113 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 AQP8O94778 261 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 EIF4EP06730 217 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 IL7P13232 177 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 GDF1P27539 372 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 LAP3P28838 519 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 RFC3P40938 356 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CSNK2A1P68400 391 aaPredicted RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 LRFN4Q6PJG9 635 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CREB3L2Q70SY1 520 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 GGNQ86UU5 652 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 SAMD12Q8N8I0 201 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 TRMT10AQ8TBZ6 339 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 MCHR2Q969V1 340 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF385AQ96PM9 386 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 DHRS9Q9BPW9 319 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 UTP23Q9BRU9 249 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 COMMD4Q9H0A8 199 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ZCCHC4Q9H5U6 513 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 PPP1R3EQ9H7J1 279 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 GTF2A1LQ9UNN4 478 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF726A6NNF4 738 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FAM25AB3EWG3 89 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FAM25CB3EWG5 89 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 FAM25GB3EWG6 89 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 SLC19A2O60779 497 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF254O75437 659 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 QDPRP09417 244 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CSF3P09919 207 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 STARP49675 285 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 RIDAP52758 137 aaKnown RBP8.36□□□□□ -1.07
LINC00838-201ENST00000562956 OR1C1Q15619 314 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 SLC25A47Q6Q0C1 308 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 HDDC2Q7Z4H3 204 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 GLCCI1Q86VQ1 547 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 TMPRSS12Q86WS5 348 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CLEC1AQ8NC01 280 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 SFXN2Q96NB2 322 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 IP6K3Q96PC2 410 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 SEC61A2Q9H9S3 476 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 EMC7Q9NPA0 242 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 CYB5R1Q9UHQ9 305 aa8.36□□□□□ -1.07
LINC00838-201ENST00000562956 A0A1B0GVC2 190 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 A0A1W2PQ09 198 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 A6NIN4 97 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 GJE1A6NN92 205 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SRSF10O75494 262 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SNRPBP14678 240 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 RBMS1P29558 406 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CASRP41180 1078 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 EIF1AXP47813 144 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 CCR9P51686 369 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 AGFG1P52594 562 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SUCLG1P53597 346 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 IL18Q14116 193 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 OR2M7Q8NG81 312 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 OR9K2Q8NGE7 335 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 KCNE4Q8WWG9 221 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 KIAA1143Q96AT1 154 aaPredicted RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 NAA11Q9BSU3 229 aaPredicted RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 NPIPA2E9PIF3 369 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 NPIPA3F8WFD2 350 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 H3BUI4 141 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 GPR171O14626 319 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 SMAD9O15198 467 aaKnown RBP8.35□□□□□ -1.07
LINC00838-201ENST00000562956 YES1P07947 543 aa8.35□□□□□ -1.07
LINC00838-201ENST00000562956 MAPK3P27361 379 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms