RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 KCTD12Q96CX2 325 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 MAP6Q96JE9 813 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 C4orf45Q96LM5 186 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 DCLRE1CQ96SD1 692 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 BARHL1Q9BZE3 327 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 SLITRK2Q9H156 845 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 DEFB127Q9H1M4 99 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 NELFAQ9H3P2 528 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 FRRS1LQ9P0K9 344 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 UGT2A1Q9Y4X1 527 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 LRP12Q9Y561 859 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 PCDHGA9Q9Y5G4 932 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 R4GMQ9 66 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 ZNF724A8MTY0 619 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 IGHG3P01860 377 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 RAF1P04049 648 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 ZNF24P17028 368 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 CD40LGP29965 261 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 ETV6P41212 452 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 RPS11P62280 158 aaKnown RBP eCLIP12.2□□□□□ -0.46
TPM1-215ENST00000558868 INSL4Q14641 139 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 TAF13Q15543 124 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 STK11Q15831 433 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 SGCAQ16586 387 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 Q499Y3 187 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 SPANXN2Q5MJ10 180 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 OR7E24Q6IFN5 339 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 C16orf87Q6PH81 154 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 MCEMP1Q8IX19 187 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 CPT1CQ8TCG5 803 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 ZNF845Q96IR2 970 aaPredicted RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 SCNM1Q9BWG6 230 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 RBM24Q9BX46 236 aaKnown RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 CENPMQ9NSP4 180 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 PLEKHB1Q9UF11 243 aaPredicted RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 GDF2Q9UK05 429 aaPredicted RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 ADAM30Q9UKF2 790 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 B3GNT3Q9Y2A9 372 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 NOSIPQ9Y314 301 aaKnown RBP12.2□□□□□ -0.46
TPM1-215ENST00000558868 MSRB2Q9Y3D2 182 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 CMAHPQ9Y471 501 aa12.2□□□□□ -0.46
TPM1-215ENST00000558868 LOC400499M0QZD8 3231 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 ZNF878C9JN71 531 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 LOC110117498-PIK3R3F6TDL0 507 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 RGS5O15539 181 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 MRPL33O75394 65 aaKnown RBP12.19□□□□□ -0.46
TPM1-215ENST00000558868 BMP4P12644 408 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 RAB3BP20337 219 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 CDAP32320 146 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 PPP5CP53041 499 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 PPP3R1P63098 170 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 MRPS34P82930 218 aaKnown RBP12.19□□□□□ -0.46
TPM1-215ENST00000558868 ZNF169Q14929 603 aaPredicted RBP12.19□□□□□ -0.46
TPM1-215ENST00000558868 WDR38Q5JTN6 314 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 DDI2Q5TDH0 399 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 SPATC1Q76KD6 591 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 GJC3Q8NFK1 279 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 OR13C5Q8NGS8 318 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 WDFY2Q96P53 400 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 WACQ9BTA9 647 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 LINC00470Q9BZP3 86 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 MOB1AQ9H8S9 216 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 ZNF175Q9Y473 711 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 ALPK2Q86TB3 2170 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 CNTRLQ7Z7A1 2325 aa12.19□□□□□ -0.46
TPM1-215ENST00000558868 ANKRD61A6NGH8 418 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 ITGB2P05107 769 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 OCM2P0CE71 109 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 FCGR2AP12318 317 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 HSD11B1P28845 292 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 KIR3DL2P43630 455 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 MMP16P51512 607 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 GRB2P62993 217 aaKnown RBP12.18□□□□□ -0.46
TPM1-215ENST00000558868 RNFT1Q5M7Z0 435 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 FAM27BQ5VT28 67 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 TMEM244Q5VVB8 128 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 OTPQ5XKR4 325 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 CORO6Q6QEF8 472 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 PRSS35Q8N3Z0 413 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 ABHD3Q8WU67 409 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 HSD17B8Q92506 261 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 DERL3Q96Q80 235 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 OR14A2Q96R54 314 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 SLC30A2Q9BRI3 323 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 BCO1Q9HAY6 547 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 NOX4Q9NPH5 578 aa12.18□□□□□ -0.46
TPM1-215ENST00000558868 GTF2A1LQ9UNN4 478 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms