RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TMEM269A0A1B0GVZ9 245 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 NTN3O00634 580 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 SSNA1O43805 119 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 ICMTO60725 284 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 NDUFB6O95139 128 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 HPXP02790 462 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 CFIP05156 583 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 CSF1P09603 554 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 H2BFMP0C1H6 154 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 UBCP0CG48 685 aaKnown RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 FAUP35544 74 aaKnown RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 EIF1P41567 113 aaKnown RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 SSBP1Q04837 148 aaKnown RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 LRFN4Q6PJG9 635 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 LINC00346Q8IVM7 164 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 UEVLDQ8IX04 471 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 BEST4Q8NFU0 473 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 OR13C3Q8NGS6 347 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 MAFAQ8NHW3 353 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 SLC25A43Q8WUT9 341 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 C11orf40Q8WZ69 217 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 OR10A4Q9H209 315 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 CYB5R1Q9UHQ9 305 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 GPN3Q9UHW5 284 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 FREM3P0C091 2139 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 TMEM272A0A1B0GTI8 110 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 LOC107986453A0A1B0GWG9 222 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 D6RAR5 112 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 TP53I11O14683 189 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 ALDOBP05062 364 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 HTR2CP28335 458 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 LAP3P28838 519 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 VEGFCP49767 419 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 TMEM81Q6P7N7 255 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 ZNF782Q6ZMW2 699 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 HDDC2Q7Z4H3 204 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 BIVMQ86UB2 503 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 WDSUB1Q8N9V3 476 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 PLPP7Q8NBV4 271 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 OR10H5Q8NGA6 315 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 OR6M1Q8NGM8 313 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 FBXL2Q9UKC9 423 aa15.99■□□□□ 0.15
GNE-204ENST00000539208 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 CHCHD2Q9Y6H1 151 aaPredicted RBP15.99■□□□□ 0.15
GNE-204ENST00000539208 IL5P05113 134 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 DNASE1L1P49184 302 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
GNE-204ENST00000539208 LINC00303Q3SY05 128 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 GLDNQ6ZMI3 551 aaPredicted RBP15.98■□□□□ 0.15
GNE-204ENST00000539208 ZNF767PQ75MW2 155 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 ZNF431Q8TF32 576 aaPredicted RBP15.98■□□□□ 0.15
GNE-204ENST00000539208 EMC6Q9BV81 110 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 ZNF700Q9H0M5 742 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 PTGES2Q9H7Z7 377 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 SCP2D1Q9UJQ7 156 aa15.98■□□□□ 0.15
GNE-204ENST00000539208 LOC390937A0A1W2PQ73 354 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 ARPC1BO15143 372 aaKnown RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 KLK3P07288 261 aaPredicted RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 INPP5JQ15735 1006 aaPredicted RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 C1orf100Q5SVJ3 147 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 AGBL5Q8NDL9 886 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 DACT3Q96B18 629 aaPredicted RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 NPDC1Q9NQX5 325 aaPredicted RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 DLL4Q9NR61 685 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 FAM206AQ9NX38 181 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 MGAT4AQ9UM21 535 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 HDGFL3Q9Y3E1 203 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 TRAV18A0A075B6X5 111 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 IGHV1-45A0A0A0MS14 117 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 LOC102725191A0A1B0GVB3 256 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 PGA4P0DJD7 388 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 PGA3P0DJD8 388 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 GABRA1P14867 456 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 CPN1P15169 458 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 ZNF28P17035 718 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 PRSS3P35030 304 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 CAPZA1P52907 286 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 ZP1P60852 638 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 SNRPD2P62316 118 aaKnown RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 ZFP36L1Q07352 338 aaKnown RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 C19orf57Q0VDD7 668 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 CAMK2DQ13557 499 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 PCGF3Q3KNV8 242 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 GLYATL3Q5SZD4 288 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 LYPD6Q86Y78 171 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 NKAIN3Q8N8D7 197 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 OR4K17Q8NGC6 315 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 PTX4Q96A99 478 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 ZBTB8AQ96BR9 441 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 FOXRED1Q96CU9 486 aaPredicted RBP15.97■□□□□ 0.15
GNE-204ENST00000539208 SLAMF6Q96DU3 332 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 IMMP1LQ96LU5 166 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 GPR137Q96N19 417 aa15.97■□□□□ 0.15
GNE-204ENST00000539208 A0A087WZY1 265 aa15.96■□□□□ 0.15
GNE-204ENST00000539208 A0A0A6YYH2 397 aa15.96■□□□□ 0.15
GNE-204ENST00000539208 A6NJ64 397 aa15.96■□□□□ 0.15
GNE-204ENST00000539208 SULT1C2O00338 296 aa15.96■□□□□ 0.15
GNE-204ENST00000539208 TRAF3IP2O43734 574 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms