RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 Q499Y3 187 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 KRTCAP3Q53RY4 240 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 SLC25A47Q6Q0C1 308 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 FAM180AQ6UWF9 173 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 NHLRC1Q6VVB1 395 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 RPTNQ6XPR3 784 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 GALNTL5Q7Z4T8 443 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 DCXRQ7Z4W1 244 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF843Q8N446 348 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 FAM109AQ8N4B1 249 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 RPS4Y2Q8TD47 263 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 SMAP2Q8WU79 429 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 MCHR2Q969V1 340 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 RELTQ969Z4 430 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 TRMT61AQ96FX7 289 aaKnown RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 ABHD6Q9BV23 337 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 CCDC32Q9BV29 185 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 TTTY10Q9BZA0 68 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 PRRG4Q9BZD6 226 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 LDAHQ9H6V9 325 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 EXO5Q9H790 373 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF703Q9H7S9 590 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 MRPL22Q9NWU5 206 aaKnown RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 GRIP1Q9Y3R0 1128 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 UGT2A1Q9Y4X1 527 aa9.11□□□□□ -0.95
HDAC3-214ENST00000495485 GCN1Q92616 2671 aaKnown RBP9.11□□□□□ -0.95
HDAC3-214ENST00000495485 SPTAN1Q13813 2472 aaKnown RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 TTLL8A6PVC2 850 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 NOTOA8MTQ0 251 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF878C9JN71 531 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 RFPL3SP0C7P2 107 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 OCM2P0CE71 109 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 BMP4P12644 408 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 SRMP19623 302 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 HSD11B1P28845 292 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 TNFSF8P32971 234 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ZNF133P52736 654 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 SUCLG1P53597 346 aaKnown RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 PPIAP62937 165 aaKnown RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 GRB2P62993 217 aaKnown RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 FOXK1P85037 733 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 FMODQ06828 376 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 DOC2BQ14184 412 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ETFDHQ16134 617 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 C10orf128Q5T292 105 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 TMEM244Q5VVB8 128 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 CARD17Q5XLA6 110 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 XKRXQ6PP77 449 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 LYPD4Q6UWN0 246 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 FCRLAQ7L513 359 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 AAED1Q7RTV5 226 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 CCDC190Q86UF4 302 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 MCEMP1Q8IX19 187 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 UBQLNLQ8IYU4 475 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 GPR137CQ8N3F9 429 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ZFP62Q8NB50 900 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 OR2G2Q8NGZ5 317 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 OR10D3Q8NH80 312 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 C11orf40Q8WZ69 217 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ABTB1Q969K4 478 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 TMEM54Q969K7 222 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 DIRAS2Q96HU8 199 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 CMTM3Q96MX0 182 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 WACQ9BTA9 647 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ULBP2Q9BZM5 246 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 NELFAQ9H3P2 528 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 MOB1AQ9H8S9 216 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 SLCO1C1Q9NYB5 712 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 PLA2G3Q9NZ20 509 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 ABRACLQ9P1F3 81 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 CKLFQ9UBR5 152 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 PLEKHB1Q9UF11 243 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-214ENST00000495485 R4GMQ9 66 aa9.1□□□□□ -0.95
HDAC3-214ENST00000495485 A0A0G2JMM0 328 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 A0A1W2PPB8 328 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 A0A1W2PRS3 328 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FABP12A6NFH5 140 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 ACOD1A6NK06 481 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FAM25AB3EWG3 89 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FAM25CB3EWG5 89 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 FAM25GB3EWG6 89 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 J3QRK9 145 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 K7EM74 188 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 PSMD9O00233 223 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CTDSP2O14595 271 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 DHHO43323 396 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CXCL13O43927 109 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CYTIPO60759 359 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 ZFPL1O95159 310 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 ABHD16AO95870 558 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 F10P00742 488 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 APOA1P02647 267 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 UBCP0CG48 685 aaKnown RBP9.09□□□□□ -0.95
HDAC3-214ENST00000495485 MSR1P21757 451 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CAPZA1P52907 286 aa9.09□□□□□ -0.95
HDAC3-214ENST00000495485 CLDN15P56746 228 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms