RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CECR9P0C854 216 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 EPXP11678 715 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 APEX1P27695 318 aaKnown RBP11.51□□□□□ -0.57
HDAC1-208ENST00000482310 HTR1FP30939 366 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 ATP6V1E1P36543 226 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 ARR3P36575 388 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 PCBD1P61457 104 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
HDAC1-208ENST00000482310 PSG4Q00888 419 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 SCRN3Q0VDG4 424 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 IL18R1Q13478 541 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 NRN1LQ496H8 165 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 SEZ6L2Q6UXD5 910 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 DCXRQ7Z4W1 244 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 TIGD4Q8IY51 512 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 OR4F15Q8NGB8 312 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 RHOXF1Q8NHV9 184 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 SLC7A6Q92536 515 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 RFKQ969G6 155 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 RADILQ96JH8 1075 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 DACH2Q96NX9 599 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 WNT5BQ9H1J7 359 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 KLHDC2Q9Y2U9 406 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 PSMD9O00233 223 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ABCD4O14678 606 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 SGCEO43556 437 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 WBP4O75554 376 aaKnown RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 HRGP04196 525 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 DBTP11182 482 aaKnown RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CBR1P16152 277 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CRYGSP22914 178 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 PEX19P40855 299 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 HTR5AP47898 357 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 BLVRAP53004 296 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ISL1P61371 349 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 PLP2Q04941 152 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF91Q05481 1191 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 OCLNQ16625 522 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CCDC92Q53HC0 331 aaPredicted RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 MEDAGQ5VYS4 303 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 USP51Q70EK9 711 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 THAP5Q7Z6K1 395 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF584Q8IVC4 421 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 SLC35F2Q8IXU6 374 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CCDC36Q8IYA8 594 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 RFLNBQ8N5W9 214 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 OR10H4Q8NGA5 316 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 THEM6Q8WUY1 208 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 MAP6Q96JE9 813 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 Q96MT0 163 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 KCNS3Q9BQ31 491 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 RHNO1Q9BSD3 238 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 NGBQ9NPG2 151 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CENPMQ9NSP4 180 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 WARS2Q9UGM6 360 aaKnown RBP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.5□□□□□ -0.57
HDAC1-208ENST00000482310 TIMM10BQ9Y5J6 103 aa11.5□□□□□ -0.57
HDAC1-208ENST00000482310 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 FAM20BO75063 409 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 TMCC2O75069 709 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 PLAUP00749 431 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF14P17017 642 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-208ENST00000482310 CD40P25942 277 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 APLNRP35414 380 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 MTNR1AP48039 350 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 GALK2Q01415 458 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 CDK5R2Q13319 367 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 TAF13Q15543 124 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 TMEM108Q6UXF1 575 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
HDAC1-208ENST00000482310 SLC16A9Q7RTY1 509 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 SLC30A7Q8NEW0 376 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 GJC3Q8NFK1 279 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 KBTBD8Q8NFY9 601 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 BOD1Q96IK1 185 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 AMELYQ99218 206 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 SPOCK3Q9BQ16 436 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
HDAC1-208ENST00000482310 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 CDH20Q9HBT6 801 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 CYB5R1Q9UHQ9 305 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 LAMP5Q9UJQ1 280 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 RAB26Q9ULW5 256 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 COPS3Q9UNS2 423 aa11.49□□□□□ -0.57
HDAC1-208ENST00000482310 PCDHGB5Q9Y5G0 923 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms