RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	DHRS7C	A6NNS2	312 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF878	C9JN71	531 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PRR23D1	E9PI22	279 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	NDUFS8	O00217	210 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	DCTN6	O00399	190 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SOCS2	O14508	198 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	IGHV3-13	P01766	116 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	HLA-H	P01893	362 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TF	P02787	698 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PRF1	P14222	555 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	FOSL1	P15407	271 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF32	P17041	273 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CFL1	P23528	166 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	DNASE1	P24855	282 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	STOM	P27105	288 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	APLNR	P35414	380 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC15A1	P46059	708 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ENTPD1	P49961	510 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	IST1	P53990	364 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	DSCR9	P59020	149 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	GRB2	P62993	217 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PSG4	Q00888	419 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	GALK2	Q01415	458 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ROM1	Q03395	351 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	FMOD	Q06828	376 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TOP3A	Q13472	1001 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CRMP1	Q14194	572 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	GINS1	Q14691	196 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OCLN	Q16625	522 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PABPC1L2A	Q5JQF8	200 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ELFN2	Q5R3F8	820 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	AADACL4	Q5VUY2	407 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	LPCAT4	Q643R3	524 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC18B1	Q6NT16	456 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	DRAM2	Q6UX65	266 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	FBXW12	Q6X9E4	464 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	VASH1	Q7L8A9	365 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CDH24	Q86UP0	819 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM200A	Q86VY9	491 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	KLB	Q86Z14	1044 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	WFDC8	Q8IUA0	241 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TIGD4	Q8IY51	512 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SYT14	Q8NB59	555 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCDC54	Q8NEL0	328 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC30A7	Q8NEW0	376 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR52H1	Q8NGJ2	320 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR52E2	Q8NGJ4	325 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR5L1	Q8NGL2	311 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR4Q3	Q8NH05	313 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR4K13	Q8NH42	304 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR52N5	Q8NH56	324 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	OTOS	Q8NHW6	89 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM163	Q8TC26	289 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ST7L	Q8TDW4	575 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SMAP2	Q8WU79	429 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM171	Q8WVE6	324 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	RNF133	Q8WVZ7	376 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PYDC1	Q8WXC3	89 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	ASB17	Q8WXJ9	295 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PTP4A1	Q93096	173 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPL24	Q96A35	216 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	RASD2	Q96D21	266 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	FBXO17	Q96EF6	278 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	DNAJA3	Q96EY1	480 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PIK3IP1	Q96FE7	263 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525		Q96MT0	163 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	HS3ST6	Q96QI5	342 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CIB1	Q99828	191 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PKP2	Q99959	881 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	C1QTNF5	Q9BXJ0	243 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	VCX	Q9H320	206 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	MS4A5	Q9H3V2	200 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	RGCC	Q9H4X1	137 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	MOB1A	Q9H8S9	216 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CCNB1IP1	Q9NPC3	277 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	RPRD1B	Q9NQG5	326 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPS18A	Q9NVS2	196 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	MRPL22	Q9NWU5	206 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLCO1C1	Q9NYB5	712 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CISD1	Q9NZ45	108 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	WARS2	Q9UGM6	360 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	NOP16	Q9Y3C1	178 aa	Known RBP	4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	PCDHGB1	Q9Y5G3	927 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	LHFPL6	Q9Y693	200 aa		4.4	□□□□□ -1.71
HDAC6-223	ENST00000480525	CSMD1	Q96PZ7	3565 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	MAP1A	P78559	2803 aa	Predicted RBP	4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	LOC390937	A0A1W2PQ73	354 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	IRGM	A1A4Y4	181 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525		E7EQL1	145 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	IFNL4	K9M1U5	179 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	EI24	O14681	340 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	SMPD2	O60906	423 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	SERPINI2	O75830	405 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	MT-ND5	P03915	603 aa		4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	ERCC1	P07992	297 aa	Predicted RBP	4.39	□□□□□ -1.71
HDAC6-223	ENST00000480525	CD55	P08174	381 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms