RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MRPL38Q96DV4 380 aaKnown RBP12.41□□□□□ -0.42
NPHP4-207ENST00000470763 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
NPHP4-207ENST00000470763 PFDN5Q99471 154 aa12.41□□□□□ -0.42
NPHP4-207ENST00000470763 GAS2L1Q99501 681 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-207ENST00000470763 DUSP22Q9NRW4 184 aa12.41□□□□□ -0.42
NPHP4-207ENST00000470763 PRR13Q9NZ81 148 aa12.41□□□□□ -0.42
NPHP4-207ENST00000470763 DCDC2BA2VCK2 349 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 FBP1P09467 338 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 LSSP48449 732 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 PGDP52209 483 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 RNF212Q495C1 297 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 TCEAL5Q5H9L2 206 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 FAM76BQ5HYJ3 339 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 FHL5Q5TD97 284 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 ERN2Q76MJ5 926 aaKnown RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 ZNF561Q8N587 486 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 WDSUB1Q8N9V3 476 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SLC41A2Q96JW4 573 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 CMKLR1Q99788 373 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SULT4A1Q9BR01 284 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 TCEAL7Q9BRU2 100 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 RNF126Q9BV68 326 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 TRIM2Q9C040 744 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 MYOZ1Q9NP98 299 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 MRPS33Q9Y291 106 aaKnown RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 KIF26BQ2KJY2 2108 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 TMEM212A6NML5 194 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 NUDT19A8MXV4 375 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 MED6O75586 246 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 HGFACQ04756 655 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 DMWDQ09019 674 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 ALG11Q2TAA5 492 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SLC35D2Q76EJ3 337 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 FANCMQ8IYD8 2048 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 IGLON5A6NGN9 336 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 FGF17O60258 216 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 AGAP20933 346 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 IGFBP4P22692 258 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 PPICP45877 212 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 PMPCAQ10713 525 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 ULK3Q6PHR2 472 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 TMEM52Q8NDY8 209 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 SUSD6Q92537 303 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 CMBLQ96DG6 245 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 IP6K3Q96PC2 410 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
NPHP4-207ENST00000470763 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.43
NPHP4-207ENST00000470763 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 WRBO00258 174 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 ARPC3O15145 178 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 P2RX6O15547 441 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 LRP3O75074 770 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 STK17BO94768 372 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 AK1P00568 194 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 RCC1P18754 421 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-207ENST00000470763 MAP3K8P41279 467 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 CENPAP49450 140 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 SQSTM1Q13501 440 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 NNATQ16517 81 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 ADAM5Q6NVV9 412 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 CDC20BQ86Y33 519 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
NPHP4-207ENST00000470763 MRPS18BQ9Y676 258 aaKnown RBP12.39□□□□□ -0.43
NPHP4-207ENST00000470763 ACTR1AP61163 376 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 EXOSC6Q5RKV6 272 aaKnown RBP12.39□□□□□ -0.43
NPHP4-207ENST00000470763 PRSS41Q7RTY9 318 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 OR5AC2Q9NZP5 309 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 KCNG2Q9UJ96 466 aa12.39□□□□□ -0.43
NPHP4-207ENST00000470763 RNF224P0DH78 156 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 HLA-GP17693 338 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 HTR2CP28335 458 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
NPHP4-207ENST00000470763 TSFMP43897 325 aaKnown RBP12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CTXN1P60606 82 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 PPP1R3BQ86XI6 285 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 OR51A2Q8NGJ7 313 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 ZNF563Q8TA94 476 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 MBNL1Q9NR56 388 aaKnown RBP12.38□□□□□ -0.43
NPHP4-207ENST00000470763 FBXL21Q9UKT6 434 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 MBTPS2O43462 519 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 IGKV1D-16P01601 117 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 ACKR3P25106 362 aa12.38□□□□□ -0.43
NPHP4-207ENST00000470763 CMPK1P30085 196 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms