RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RCN3Q96D15 328 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 ESM1Q9NQ30 184 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 ARGLU1Q9NWB6 273 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-207ENST00000467819 CMTM6Q9NX76 183 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 ADAM18Q9Y3Q7 739 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 NPTNQ9Y639 398 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 CAPN7Q9Y6W3 813 aa17.81■□□□□ 0.44
COL9A3-207ENST00000467819 FFAR1O14842 300 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 PRSS23O95084 383 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 ZNF682O95780 498 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 SBK2P0C263 348 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 GSTM3P21266 225 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 LIMS1P48059 325 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 TBPL2Q6SJ96 375 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 ZNF730Q6ZMV8 503 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 ZER1Q7Z7L7 766 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 SYT9Q86SS6 491 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 TREML1Q86YW5 311 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 POU5F2Q8N7G0 328 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 GRHPRQ9UBQ7 328 aa17.8■□□□□ 0.44
COL9A3-207ENST00000467819 A0A087WUU8 490 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 SASH3O75995 380 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 IGHV2-70P01814 119 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 ZFP36P26651 326 aaKnown RBP17.79■□□□□ 0.44
COL9A3-207ENST00000467819 SLC9A3P48764 834 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 CDK5R2Q13319 367 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 ANKDD1AQ495B1 522 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 NPEPL1Q8NDH3 523 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 OR2Z1Q8NG97 314 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 ACOT11Q8WXI4 607 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-207ENST00000467819 Q96M85 177 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 TMEM106BQ9NUM4 274 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 ARMCX1Q9P291 453 aa17.79■□□□□ 0.44
COL9A3-207ENST00000467819 PURGQ9UJV8 347 aaKnown RBP17.79■□□□□ 0.44
COL9A3-207ENST00000467819 XKRYO14609 159 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 SGCEO43556 437 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 SPRY1O43609 319 aaPredicted RBP17.78■□□□□ 0.44
COL9A3-207ENST00000467819 FOXH1O75593 365 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 FSHBP01225 129 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 COX5BP10606 129 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 TNFSF4P23510 183 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 SCRN3Q0VDG4 424 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 IFI44LQ53G44 452 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 MESTQ5EB52 335 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 OTPQ5XKR4 325 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 C1orf94Q6P1W5 598 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 Q6ZR03 302 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 MBOAT2Q6ZWT7 520 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 RNF113BQ8IZP6 322 aaKnown RBP17.78■□□□□ 0.44
COL9A3-207ENST00000467819 ZDHHC22Q8N966 263 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 ZMYND19Q96E35 227 aaPredicted RBP17.78■□□□□ 0.44
COL9A3-207ENST00000467819 ZNF570Q96NI8 536 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 TBCCD1Q9NVR7 557 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 EGFL7Q9UHF1 273 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 PPIAL4AQ9Y536 164 aa17.78■□□□□ 0.44
COL9A3-207ENST00000467819 DOCK11Q5JSL3 2073 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 CXCR6O00574 342 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 GSTA4O15217 222 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 CD14P08571 375 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-207ENST00000467819 ZNF26P17031 533 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-207ENST00000467819 FPR2P25090 351 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 LIPEQ05469 1076 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 ZBED5Q49AG3 693 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 FKBP9P1Q75LS8 142 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 VASH1Q7L8A9 365 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-207ENST00000467819 ARPINQ7Z6K5 226 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 SLC15A3Q8IY34 581 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 ITLN1Q8WWA0 313 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 SLC7A6Q92536 515 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 RASD2Q96D21 266 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 CMBLQ96DG6 245 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 HSH2DQ96JZ2 352 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 WACQ9BTA9 647 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 RERGLQ9H628 205 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 MMP26Q9NRE1 261 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 PLEK2Q9NYT0 353 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 AP3M1Q9Y2T2 418 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 STARD10Q9Y365 291 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 MGAM2Q2M2H8 2515 aa17.77■□□□□ 0.44
COL9A3-207ENST00000467819 PRSS37A4D1T9 235 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 CTLA4P16410 223 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 ERFP50548 548 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 UBA52P62987 128 aaKnown RBP17.76■□□□□ 0.43
COL9A3-207ENST00000467819 RRM2BQ7LG56 351 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 SPICQ8N5J4 248 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 SAMD8Q96LT4 415 aa17.76■□□□□ 0.43
COL9A3-207ENST00000467819 TEX13CA0A0J9YWL9 993 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 SERPINA1P01009 418 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 EGR1P18146 543 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 TNFRSF1AP19438 455 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 KITLGP21583 273 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 SEC61A1P61619 476 aaKnown RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 AQP6Q13520 282 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 KRR1Q13601 381 aaKnown RBP17.75■□□□□ 0.43
COL9A3-207ENST00000467819 AWAT1Q58HT5 328 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 ARMCX4Q5H9R4 360 aa17.75■□□□□ 0.43
COL9A3-207ENST00000467819 TMPRSS11FQ6ZWK6 438 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms