RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 OFCC1Q8IZS5 231 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 SAMD8Q96LT4 415 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 DCLRE1CQ96SD1 692 aaKnown RBP19.23■□□□□ 0.67
USP42-205ENST00000465073 VIPAS39Q9H9C1 493 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 SAR1AQ9NR31 198 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 DDX28Q9NUL7 540 aaKnown RBP19.23■□□□□ 0.67
USP42-205ENST00000465073 TMEM106BQ9NUM4 274 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 MGAM2Q2M2H8 2515 aa19.23■□□□□ 0.67
USP42-205ENST00000465073 LOC100653049A0A140TA62 436 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 ELOVL7A1L3X0 281 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 KRT34O76011 436 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 TROVE2P10155 538 aaKnown RBP eCLIP19.22■□□□□ 0.67
USP42-205ENST00000465073 TNFRSF1AP19438 455 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 SLC9A3P48764 834 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 UBA52P62987 128 aaKnown RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 SCRN3Q0VDG4 424 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 RBMS3Q6XE24 437 aaKnown RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 KLHL36Q8N4N3 616 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 SPICQ8N5J4 248 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 ZNF283Q8N7M2 679 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 POP5Q969H6 163 aaKnown RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 PURGQ9UJV8 347 aaKnown RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 POLR3KQ9Y2Y1 108 aaPredicted RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 AHCYL1O43865 530 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 IFNW1P05000 195 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 SCG5P05408 212 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 FUT4P22083 530 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 YAP1P46937 504 aaKnown RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 TMEM155Q4W5P6 130 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 AWAT1Q58HT5 328 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 FAM156AQ8NDB6 213 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 ACOT11Q8WXI4 607 aaPredicted RBP19.22■□□□□ 0.67
USP42-205ENST00000465073 C22orf15Q8WYQ4 148 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 DCAF16Q9NXF7 216 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 RHCGQ9UBD6 479 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 GRHPRQ9UBQ7 328 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 EGFL7Q9UHF1 273 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 AP3M1Q9Y2T2 418 aa19.22■□□□□ 0.67
USP42-205ENST00000465073 ARHGAP32A7KAX9 2087 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 KITLGP21583 273 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 RPL4P36578 427 aaKnown RBP19.21■□□□□ 0.67
USP42-205ENST00000465073 HTR5AP47898 357 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 LRRC28Q86X40 367 aaPredicted RBP19.21■□□□□ 0.67
USP42-205ENST00000465073 DEFB108BQ8NET1 73 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 OR2Z1Q8NG97 314 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 OR13C2Q8NGS9 318 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 COG8Q96MW5 612 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 PATZ1Q9HBE1 687 aaKnown RBP19.21■□□□□ 0.67
USP42-205ENST00000465073 EMC7Q9NPA0 242 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 SNX13Q9Y5W8 968 aa19.21■□□□□ 0.67
USP42-205ENST00000465073 H7C1C5 153 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 XKRYO14609 159 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 SURF4O15260 269 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 SGCEO43556 437 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 DOK2O60496 412 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 CD14P08571 375 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 SLC6A9P48067 706 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 LCN6P62502 163 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 TUSC1Q2TAM9 212 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 ZNF730Q6ZMV8 503 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 Q6ZR03 302 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 HAVCR1Q96D42 359 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 CMBLQ96DG6 245 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 MMP26Q9NRE1 261 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 IL19Q9UHD0 177 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 NUP50Q9UKX7 468 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 AUP1Q9Y679 476 aa19.2■□□□□ 0.66
USP42-205ENST00000465073 TANC2Q9HCD6 1990 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 J3KTA2 159 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 FFAR1O14842 300 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 BTG1P62324 171 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 ZNF154Q13106 437 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 ARMCX4Q5H9R4 360 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 TMPRSS11FQ6ZWK6 438 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 MBOAT2Q6ZWT7 520 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 VASH1Q7L8A9 365 aaPredicted RBP19.19■□□□□ 0.66
USP42-205ENST00000465073 VTCN1Q7Z7D3 282 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 GPA33Q99795 319 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 POFUT1Q9H488 388 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 PPP1R3CQ9UQK1 317 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 STARD10Q9Y365 291 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 ADAM18Q9Y3Q7 739 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 PPIAL4AQ9Y536 164 aa19.19■□□□□ 0.66
USP42-205ENST00000465073 A0A087WUU8 490 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 PRSS37A4D1T9 235 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 TRAPPC2LH3BP13 241 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 ZNF12P17014 697 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 FOXL1Q12952 345 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 HNRNPA0Q13151 305 aaKnown RBP19.18■□□□□ 0.66
USP42-205ENST00000465073 ZBED5Q49AG3 693 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 DOK3Q7L591 496 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 SIGLECL1Q8N7X8 197 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 PTP4A1Q93096 173 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 Q96M85 177 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 NDEL1Q9GZM8 345 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 PLEK2Q9NYT0 353 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 INSIG2Q9Y5U4 225 aa19.18■□□□□ 0.66
USP42-205ENST00000465073 HKR1P10072 659 aa19.17■□□□□ 0.66
USP42-205ENST00000465073 AQP6Q13520 282 aa19.17■□□□□ 0.66
USP42-205ENST00000465073 ZMYND11Q15326 602 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms