RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 NDUFAF6Q330K2 333 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZBED5Q49AG3 693 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 PTPN20Q4JDL3 420 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 SELENOHQ8IZQ5 122 aaKnown RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 VKORC1L1Q8N0U8 176 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 SPAG16Q8N0X2 631 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 CD177Q8N6Q3 437 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZFP41Q8N8Y5 198 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 ITFG1Q8TB96 612 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 CCDC12Q8WUD4 166 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 RPEQ96AT9 228 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 DYNLL2Q96FJ2 89 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 SIGLEC12Q96PQ1 595 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 DEFB127Q9H1M4 99 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 RPF2Q9H7B2 306 aaKnown RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 MRM3Q9HC36 420 aaKnown RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 STX18Q9P2W9 335 aaKnown RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 VSIG4Q9Y279 399 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 V9GYY5 206 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 V9GYY9 64 aa3.68□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A0B4J2A0 478 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A1B0GVI7 797 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 A0A1B0GW15 77 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 NCBP2LA6PVI3 153 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 E7EWF7 191 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 PRMT5O14744 637 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 SC5DO75845 299 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 GIG44P09565 113 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CALM1P0DP23 149 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CALM2P0DP24 149 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CALM3P0DP25 149 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 BGNP21810 368 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CSNK1DP48730 415 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 RAB7AP51149 207 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 TAS2R19P59542 299 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 TPM4P67936 248 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 MXD1Q05195 221 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 STX3Q13277 289 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 ORC2Q13416 577 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CLINT1Q14677 625 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 GPNMBQ14956 572 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 TNXAQ16473 311 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 GSG1Q2KHT4 349 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 C5orf64Q2M2E5 130 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 TPTE2P1Q5T6R2 138 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 C6orf89Q6UWU4 347 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 C12orf54Q6X4T0 127 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 ARRDC1Q8N5I2 433 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 MDS2Q8NDY4 140 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 DUSP18Q8NEJ0 188 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 OR8D1Q8WZ84 308 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 RPUSD4Q96CM3 377 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 DNAJC1Q96KC8 554 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 FCRL1Q96LA6 429 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 SMIM14Q96QK8 99 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 P2RX4Q99571 388 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 ARHGDIGQ99819 225 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 MICU1Q9BPX6 476 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 POLR2J2Q9GZM3 115 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 POLR2J3Q9H1A7 115 aaKnown RBP3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZDHHC11Q9H8X9 412 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 CD274Q9NZQ7 290 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 SHPKQ9UHJ6 478 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 ST3GAL6Q9Y274 331 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 SLC25A15Q9Y619 301 aa3.67□□□□□ -1.82
HMGB1P26-201ENST00000452520 MGAT4DA6NG13 374 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 HIDE1A8MVS5 230 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 GABRPO00591 440 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 ERI3O43414 337 aaKnown RBP3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 UTS2O95399 124 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 LCA5LO95447 670 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 GKN3PP0CG01 181 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 PRPS2P11908 318 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 MEOX2P50222 304 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 RND2P52198 227 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 APOC4P55056 127 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 NRF1Q16656 503 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 FHL5Q5TD97 284 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZNF658Q5TYW1 1059 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 UBE2UQ5VVX9 321 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 CLEC6AQ6EIG7 209 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 LCN12Q6JVE5 192 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 MBOAT2Q6ZWT7 520 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 HORMAD1Q86X24 394 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 OR2AP1Q8NGE2 309 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 CCDC124Q96CT7 223 aaKnown RBP3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 CYTH2Q99418 400 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 UTP23Q9BRU9 249 aaKnown RBP3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 PAXXQ9BUH6 204 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 CHRNA10Q9GZZ6 450 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 ZNF702PQ9H963 129 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 PLGRKTQ9HBL7 147 aa3.66□□□□□ -1.82
HMGB1P26-201ENST00000452520 TRPC5OSA6NMA1 111 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 NME4O00746 187 aa3.65□□□□□ -1.83
HMGB1P26-201ENST00000452520 E2F6O75461 281 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms