RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 CDC40O60508 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTPA-223ENST00000452489 RAMP1O60894 148 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 LSSP48449 732 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 DHPSP49366 369 aaPredicted RBP16.85■□□□□ 0.29
PTPA-223ENST00000452489 ADAM8P78325 824 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 RNASE10Q5GAN6 216 aaKnown RBP16.85■□□□□ 0.29
PTPA-223ENST00000452489 TMEM220Q6QAJ8 160 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 OR2AP1Q8NGE2 309 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 Q8WTZ3 238 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 PLD4Q96BZ4 506 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 NMES1Q9C002 83 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 FAM86C1Q9NVL1 165 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 OR14J1Q9UGF5 321 aa16.85■□□□□ 0.29
PTPA-223ENST00000452489 LYPD3O95274 346 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 TRGC2P03986 189 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 MAPK8P45983 427 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 BPIFB3P59826 476 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 GGTLC2Q14390 218 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 TOMM34Q15785 309 aaPredicted RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 UBE2V2Q15819 145 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 EIF5AL1Q6IS14 154 aaKnown RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 SLC39A5Q6ZMH5 540 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 LANCL3Q6ZV70 420 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 NUP43Q8NFH3 380 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 BSCL2Q96G97 398 aaPredicted RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 AQP10Q96PS8 301 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 OR52A5Q9H2C5 316 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 ZDHHC6Q9H6R6 413 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 GOLT1BQ9Y3E0 138 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 EIF1AYO14602 144 aaKnown RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 TOX3O15405 576 aaPredicted RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 PTBP3O95758 552 aaKnown RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 THBS1P07996 1170 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 HKR1P10072 659 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 TIMP2P16035 220 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 EIF1AXP47813 144 aaKnown RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 SLC7A9P82251 487 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 INSM1Q01101 510 aaPredicted RBP16.84■□□□□ 0.29
PTPA-223ENST00000452489 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 HIST2H3PS2Q5TEC6 136 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 ARHGAP11AQ6P4F7 1023 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 TMEM64Q6YI46 380 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 LYPD6BQ8NI32 183 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 FAM174AQ8TBP5 190 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 SLC35A4Q96G79 324 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 CLEC4EQ9ULY5 219 aa16.84■□□□□ 0.29
PTPA-223ENST00000452489 ELOA3CA0A087WX78 387 aaPredicted RBP16.83■□□□□ 0.28
PTPA-223ENST00000452489 TRBV5-5A0A0J9YX44 114 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 NDUFS4O43181 175 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 EFSO43281 561 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 LEFTY1O75610 366 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 SPTBP11277 2137 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
PTPA-223ENST00000452489 DPEP1P16444 411 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 RAB1AP62820 205 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 AKR1C8PQ5T2L2 129 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 OR2T2Q6IF00 324 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 PRSS54Q6PEW0 395 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 GPR137CQ8N3F9 429 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 TMEM104Q8NE00 496 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 OR56A1Q8NGH5 318 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 GRHL3Q8TE85 626 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 ZNF587Q96SQ5 575 aaPredicted RBP16.83■□□□□ 0.28
PTPA-223ENST00000452489 G6PC3Q9BUM1 346 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 SLC2A8Q9NY64 477 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 PADI3Q9ULW8 664 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 FBXO7Q9Y3I1 522 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 SLCO1B1Q9Y6L6 691 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 FITM1A5D6W6 292 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 DUS4LO95620 317 aaKnown RBP16.83■□□□□ 0.28
PTPA-223ENST00000452489 IL18BPO95998 194 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 DIO1P49895 249 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 SLC16A11Q8NCK7 471 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 BEND2Q8NDZ0 799 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 CDS1Q92903 461 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 NMNAT3Q96T66 252 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 HIST1H2BLQ99880 126 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 C6orf106Q9H6K1 298 aaPredicted RBP16.83■□□□□ 0.28
PTPA-223ENST00000452489 KLHDC2Q9Y2U9 406 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 MED31Q9Y3C7 131 aa16.83■□□□□ 0.28
PTPA-223ENST00000452489 SMCO3A2RU48 225 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 ZNF840PA6NDX5 716 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
PTPA-223ENST00000452489 SCAND1P57086 179 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 ZNF616Q08AN1 781 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 SLC22A6Q4U2R8 563 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 ZNF793Q6ZN11 406 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 TRAPPC5Q8IUR0 188 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 SFXN5Q8TD22 340 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 THOC3Q96J01 351 aaKnown RBP16.82■□□□□ 0.28
PTPA-223ENST00000452489 NOL4LQ96MY1 436 aaPredicted RBP16.82■□□□□ 0.28
PTPA-223ENST00000452489 GNRHR2Q96P88 292 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 KCNJ16Q9NPI9 418 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 TAC3Q9UHF0 121 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 IER3IP1Q9Y5U9 82 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 SCN5AQ14524 2016 aa16.82■□□□□ 0.28
PTPA-223ENST00000452489 CCDC187A0A096LP49 1063 aa16.81■□□□□ 0.28
PTPA-223ENST00000452489 TGIF2-C20orf24A0A0A6YYL0 155 aa16.81■□□□□ 0.28
PTPA-223ENST00000452489 LOC100289279A0A1B0GTE1 492 aa16.81■□□□□ 0.28
PTPA-223ENST00000452489 C9J4A7 227 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 863 ms