RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 LOC100509620A0A075B734 347 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 A0A1W2PPL8 197 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 CXCR6O00574 342 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 SGCEO43556 437 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 SPRY3O43610 288 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TIMM8AO60220 97 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 SHOX2O60902 331 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 UBOX5O94941 541 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 ZNF682O95780 498 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 IGHV1-46P01743 117 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 IGHV2-5P01817 119 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 CD14P08571 375 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TNFRSF1BP20333 461 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 EPHA1P21709 976 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 COMPP49747 757 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 SMIM11AP58511 58 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 HILS1P60008 231 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 LSM6P62312 80 aaKnown RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 ACTG1P63261 375 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TNFAIP6P98066 277 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 CDK5R2Q13319 367 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TOP3AQ13472 1001 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 AQP6Q13520 282 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 KRT72Q14CN4 511 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 MTX3Q5HYI7 312 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 DNM1P34Q6PK57 102 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 C1QL2Q7Z5L3 287 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 ADCK1Q86TW2 530 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 GLB1L2Q8IW92 636 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 NRMQ8IXM6 262 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 ZNF101Q8IZC7 436 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 C3orf56Q8N813 242 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 AKR7LQ8NHP1 331 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 SGMS2Q8NHU3 365 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 GCDHQ92947 438 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 PTP4A1Q93096 173 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 CMTM5Q96DZ9 223 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 SAMD8Q96LT4 415 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TSPAN32Q96QS1 320 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 GPA33Q99795 319 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 CCDC134Q9H6E4 229 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 C7orf69Q9H7B7 122 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 ZMAT3Q9HA38 289 aaKnown RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 NMNAT1Q9HAN9 279 aaPredicted RBP6.01□□□□□ -1.45
VPS41-208ENST00000448833 LPAR2Q9HBW0 351 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 G6PC2Q9NQR9 355 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 POLE4Q9NR33 117 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 FGFR1OP2Q9NVK5 253 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 IL19Q9UHD0 177 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 ATPIF1Q9UII2 106 aa6.01□□□□□ -1.45
VPS41-208ENST00000448833 TRAV27A0A087WT01 109 aa6□□□□□ -1.45
VPS41-208ENST00000448833 A0A087WUU8 490 aa6□□□□□ -1.45
VPS41-208ENST00000448833 TEX13CA0A0J9YWL9 993 aa6□□□□□ -1.45
VPS41-208ENST00000448833 A0A1W2PRQ8 180 aa6□□□□□ -1.45
VPS41-208ENST00000448833 ISPDA4D126 451 aa6□□□□□ -1.45
VPS41-208ENST00000448833 PRSS37A4D1T9 235 aa6□□□□□ -1.45
VPS41-208ENST00000448833 OR6C6A6NF89 314 aa6□□□□□ -1.45
VPS41-208ENST00000448833 WNT9BO14905 357 aa6□□□□□ -1.45
VPS41-208ENST00000448833 DOK2O60496 412 aa6□□□□□ -1.45
VPS41-208ENST00000448833 DEAF1O75398 565 aaPredicted RBP6□□□□□ -1.45
VPS41-208ENST00000448833 KHDRBS3O75525 346 aaKnown RBP6□□□□□ -1.45
VPS41-208ENST00000448833 NDUFB2O95178 105 aa6□□□□□ -1.45
VPS41-208ENST00000448833 RAC2P15153 192 aa6□□□□□ -1.45
VPS41-208ENST00000448833 RHCEP18577 417 aa6□□□□□ -1.45
VPS41-208ENST00000448833 ADRA2CP18825 462 aa6□□□□□ -1.45
VPS41-208ENST00000448833 MAKP20794 623 aa6□□□□□ -1.45
VPS41-208ENST00000448833 KITLGP21583 273 aa6□□□□□ -1.45
VPS41-208ENST00000448833 CRABP1P29762 137 aa6□□□□□ -1.45
VPS41-208ENST00000448833 SDHAP31040 664 aa6□□□□□ -1.45
VPS41-208ENST00000448833 WNT5AP41221 380 aa6□□□□□ -1.45
VPS41-208ENST00000448833 HTR5AP47898 357 aa6□□□□□ -1.45
VPS41-208ENST00000448833 RPS6KA3P51812 740 aa6□□□□□ -1.45
VPS41-208ENST00000448833 SLC7A2P52569 658 aa6□□□□□ -1.45
VPS41-208ENST00000448833 ERVS71-1P61550 626 aa6□□□□□ -1.45
VPS41-208ENST00000448833 GUCY1A3Q02108 690 aa6□□□□□ -1.45
VPS41-208ENST00000448833 LIPEQ05469 1076 aa6□□□□□ -1.45
VPS41-208ENST00000448833 FMODQ06828 376 aa6□□□□□ -1.45
VPS41-208ENST00000448833 DGCR6Q14129 220 aa6□□□□□ -1.45
VPS41-208ENST00000448833 TMEM155Q4W5P6 130 aa6□□□□□ -1.45
VPS41-208ENST00000448833 SPATA46Q5T0L3 261 aa6□□□□□ -1.45
VPS41-208ENST00000448833 AVPI1Q5T686 147 aa6□□□□□ -1.45
VPS41-208ENST00000448833 ZNF774Q6NX45 483 aa6□□□□□ -1.45
VPS41-208ENST00000448833 HACD2Q6Y1H2 254 aa6□□□□□ -1.45
VPS41-208ENST00000448833 DPY19L2P2Q6ZN68 376 aa6□□□□□ -1.45
VPS41-208ENST00000448833 SLC15A3Q8IY34 581 aa6□□□□□ -1.45
VPS41-208ENST00000448833 MUC20Q8N307 709 aaPredicted RBP6□□□□□ -1.45
VPS41-208ENST00000448833 LRRC75AQ8NAA5 344 aa6□□□□□ -1.45
VPS41-208ENST00000448833 GJC3Q8NFK1 279 aa6□□□□□ -1.45
VPS41-208ENST00000448833 SEMA6DQ8NFY4 1073 aa6□□□□□ -1.45
VPS41-208ENST00000448833 OR13G1Q8NGZ3 307 aa6□□□□□ -1.45
VPS41-208ENST00000448833 POP5Q969H6 163 aaKnown RBP6□□□□□ -1.45
VPS41-208ENST00000448833 FAM162AQ96A26 154 aa6□□□□□ -1.45
VPS41-208ENST00000448833 RCN3Q96D15 328 aa6□□□□□ -1.45
VPS41-208ENST00000448833 RASD2Q96D21 266 aa6□□□□□ -1.45
VPS41-208ENST00000448833 HAVCR1Q96D42 359 aa6□□□□□ -1.45
VPS41-208ENST00000448833 ZNF570Q96NI8 536 aa6□□□□□ -1.45
VPS41-208ENST00000448833 MRI1Q9BV20 369 aa6□□□□□ -1.45
VPS41-208ENST00000448833 WNT5BQ9H1J7 359 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms