RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PITPNBP48739 271 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 POU3F4P49335 361 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 RGS4P49798 205 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 PRKAG1P54619 331 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 CDKN2DP55273 166 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 KLF3P57682 345 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 PSPHP78330 225 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 ARF1P84077 181 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 GALNT1Q10472 559 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 RIPK1Q13546 671 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 TRADDQ15628 312 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 OASLQ15646 514 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 CCNG2Q16589 344 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF770Q6IQ21 691 aaPredicted RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 C8orf74Q6P047 294 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 METTL2BQ6P1Q9 378 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 KLC3Q6P597 504 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM65Q6PI78 240 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 H2AFVQ71UI9 128 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 SPATA24Q86W54 205 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 DDIASQ8IXT1 998 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 OR51D1Q8NGF3 324 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 SYNPRQ8TBG9 265 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 KRT35Q92764 455 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 RNF183Q96D59 192 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 LRRC39Q96DD0 335 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 RNFT2Q96EX2 444 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 PLEKHA8Q96JA3 519 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 P2RX4Q99571 388 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 BPIFA3Q9BQP9 254 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 CCDC106Q9BWC9 280 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 TRIM5Q9C035 493 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 NAT10Q9H0A0 1025 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 WNT5BQ9H1J7 359 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 DDX31Q9H8H2 851 aaKnown RBP3.87□□□□□ -1.79
SDCBP-205ENST00000447267 WDR41Q9HAD4 459 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 NEK6Q9HC98 313 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 CTNNAL1Q9UBT7 734 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 GTF2A1LQ9UNN4 478 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 DSPPQ9NZW4 1301 aa3.87□□□□□ -1.79
SDCBP-205ENST00000447267 A0A096LPK6 155 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 MEIOCA2RUB1 952 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZSCAN5BA6NJL1 495 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM114B3SHH9 223 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ENSAO43768 121 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 PCDH7O60245 1069 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 FCMRO60667 390 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 RSL1D1O76021 490 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CRYZL1O95825 349 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ECDO95905 644 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 IGKV1D-16P01601 117 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 HLA-HP01893 362 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SPNP16150 400 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 IFNA8P32881 189 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 MDH2P40926 338 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 EIF1P41567 113 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SLC1A1P43005 524 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 RAB13P51153 203 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CCNG1P51959 295 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 RAP1GDS1P52306 607 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SELENOVP59797 346 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 SSTP61278 116 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 RPS23P62266 143 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CDKL1Q00532 357 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 EWSR1Q01844 656 aaKnown RBP eCLIP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 KLRD1Q13241 179 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 PIN1Q13526 163 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 FHL3Q13643 280 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 MAJINQ3KP22 176 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 FAM201AQ5SY85 155 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CLVS2Q5SYC1 327 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 Q5VSD8 79 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 WDR25Q64LD2 544 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 TMPPEQ6ZT21 453 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 PTCHD4Q6ZW05 846 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 VMO1Q7Z5L0 202 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 MISPQ8IVT2 679 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 NKAIN4Q8IVV8 208 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 LAS2Q8IYD9 372 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 NATD1Q8N6N6 113 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ANKRD42Q8N9B4 389 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 NAT8LQ8N9F0 302 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF565Q8N9K5 539 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZIC4Q8N9L1 334 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CCDC63Q8NA47 563 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ICA1LQ8NDH6 482 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 OR4C3Q8NH37 302 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF675Q8TD23 568 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 MAGEE2Q8TD90 523 aaPredicted RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 TSEN15Q8WW01 171 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CMTM7Q96FZ5 175 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 METTL2AQ96IZ6 378 aaKnown RBP3.86□□□□□ -1.79
SDCBP-205ENST00000447267 CMTM3Q96MX0 182 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF681Q96N22 645 aa3.86□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms