RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 RRM2BQ7LG56 351 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 ARPINQ7Z6K5 226 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 FAM156AQ8NDB6 213 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 GEMIN6Q8WXD5 167 aaKnown RBP17.55■□□□□ 0.4
CPNE1-219ENST00000440240 ZMYND19Q96E35 227 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-219ENST00000440240 FGFR1OP2Q9NVK5 253 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 SNX13Q9Y5W8 968 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 NPTNQ9Y639 398 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 CAPN7Q9Y6W3 813 aa17.55■□□□□ 0.4
CPNE1-219ENST00000440240 A0A087WUU8 490 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 J3KTA2 159 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 FFAR1O14842 300 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 SBK2P0C263 348 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 TNFRSF1AP19438 455 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 ZNF730Q6ZMV8 503 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 TMPRSS11FQ6ZWK6 438 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 MBOAT2Q6ZWT7 520 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 VTCN1Q7Z7D3 282 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 KLHL36Q8N4N3 616 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 OR13C2Q8NGS9 318 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 SAMD8Q96LT4 415 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 COG8Q96MW5 612 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 NDEL1Q9GZM8 345 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 NTN4Q9HB63 628 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 OPN4Q9UHM6 478 aa17.54■□□□□ 0.4
CPNE1-219ENST00000440240 SGCEO43556 437 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 ZNF682O95780 498 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 SCG5P05408 212 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 CD14P08571 375 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 H2AFXP16104 143 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-219ENST00000440240 FUT4P22083 530 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 HTR5AP47898 357 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 SF3A3Q12874 501 aaKnown RBP eCLIP17.53■□□□□ 0.43e-8■■■□□ 15.3
CPNE1-219ENST00000440240 ZBED5Q49AG3 693 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 IFI44LQ53G44 452 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 FKBP9P1Q75LS8 142 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 ZNF771Q7L3S4 317 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-219ENST00000440240 SLC15A3Q8IY34 581 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 SPICQ8N5J4 248 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 RP9Q8TA86 221 aaKnown RBP17.53■□□□□ 0.4
CPNE1-219ENST00000440240 RCN3Q96D15 328 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 DCLRE1CQ96SD1 692 aaKnown RBP17.53■□□□□ 0.4
CPNE1-219ENST00000440240 SLC6A7Q99884 636 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 EMC7Q9NPA0 242 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 TMEM106BQ9NUM4 274 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 CMTM6Q9NX76 183 aa17.53■□□□□ 0.4
CPNE1-219ENST00000440240 PURGQ9UJV8 347 aaKnown RBP17.53■□□□□ 0.4
CPNE1-219ENST00000440240 H7C1C5 153 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 GSTA4O15217 222 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 SURF4O15260 269 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 DOK2O60496 412 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 PRSS23O95084 383 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 FSHBP01225 129 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 IGHV2-70P01814 119 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 KITLGP21583 273 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 LCN6P62502 163 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 LIPEQ05469 1076 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 SPRNQ5BIV9 151 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 TBPL2Q6SJ96 375 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 CBLL1Q75N03 491 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 OR2Z1Q8NG97 314 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 SGMS2Q8NHU3 365 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 HAVCR1Q96D42 359 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 CMBLQ96DG6 245 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 Q96M85 177 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 ANKRD19PQ9H560 264 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 DDX28Q9NUL7 540 aaKnown RBP17.52■□□□□ 0.4
CPNE1-219ENST00000440240 IL19Q9UHD0 177 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 ADAM18Q9Y3Q7 739 aa17.52■□□□□ 0.4
CPNE1-219ENST00000440240 DYSFO75923 2080 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 PRSS37A4D1T9 235 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 CXCR6O00574 342 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 ZFP36P26651 326 aaKnown RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 TMEM155Q4W5P6 130 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 CGB2Q6NT52 195 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 RBMS3Q6XE24 437 aaKnown RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 VASH1Q7L8A9 365 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 CYP4Z1Q86W10 505 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 LRRC28Q86X40 367 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 ZNF283Q8N7M2 679 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 PTP4A1Q93096 173 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 ZNF570Q96NI8 536 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 HOPXQ9BPY8 73 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 PATZ1Q9HBE1 687 aaKnown RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 PLEK2Q9NYT0 353 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 EGFL7Q9UHF1 273 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 TMEM5Q9Y2B1 443 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 POLR3KQ9Y2Y1 108 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-219ENST00000440240 STARD10Q9Y365 291 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 ARHGAP32A7KAX9 2087 aa17.51■□□□□ 0.39
CPNE1-219ENST00000440240 MGAM2Q2M2H8 2515 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 TEX13CA0A0J9YWL9 993 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 CDC42EP2O14613 210 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 SPRY1O43609 319 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-219ENST00000440240 GPR4P46093 362 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 AQP6Q13520 282 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 MESTQ5EB52 335 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 GPR139Q6DWJ6 353 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 FAM122BQ7Z309 247 aa17.5■□□□□ 0.39
CPNE1-219ENST00000440240 ZDHHC22Q8N966 263 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms