RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	NIN	Q8N4C6	2090 aa		5.51	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TPR	P12270	2363 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	AKAP13	Q12802	2813 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	EML6	Q6ZMW3	1958 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A1B0GWA3	101 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	DHRS12	A0PJE2	317 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TMEM72	A0PK05	275 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SH3PXD2B	A1X283	911 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A8MVM7	634 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	hCG_2039718	K7EN88	272 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GNGT2	O14610	69 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ACOT8	O14734	319 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF208	O43345	1280 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CHP2	O43745	196 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SLC19A2	O60779	497 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	WDR1	O75083	606 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SYNGR4	O95473	234 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	EPPIN	O95925	133 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TK1	P04183	234 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GPI	P06744	558 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HOXD4	P09016	255 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	INHBB	P09529	407 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SBK2	P0C263	348 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	RNF224	P0DH78	156 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CCL2	P13500	99 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NQO1	P15559	274 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NQO2	P16083	231 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF708	P17019	499 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	S100P	P25815	95 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	UCP1	P25874	307 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POU1F1	P28069	291 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PSMB6	P28072	239 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HTR2A	P28223	471 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GTF2E2	P29084	291 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	BDKRB2	P30411	391 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PTGER4	P35408	488 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NAA10	P41227	235 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF136	P52737	540 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CRYBA2	P53672	197 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	B3GALT5-AS1	P59052	145 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CSNK2A1	P68400	391 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CRYZ	Q08257	329 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TRAM2	Q15035	370 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CNPY1	Q3B7I2	92 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CHRFAM7A	Q494W8	412 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GXYLT1	Q4G148	440 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PXDC1	Q5TGL8	231 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HBM	Q6B0K9	141 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	VASN	Q6EMK4	673 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TMEM211	Q6ICI0	200 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CD300LD	Q6UXZ3	194 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ESPNL	Q6ZVH7	1005 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	RBM45	Q8IUH3	476 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	LACC1	Q8IV20	430 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZDHHC21	Q8IVQ6	265 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FAM58A	Q8N1B3	248 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POC5	Q8NA72	575 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PAPD5	Q8NDF8	572 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ADPRHL1	Q8NDY3	354 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CPEB3	Q8NE35	698 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	OR4D11	Q8NGI4	311 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	OR5M9	Q8NGP3	310 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PHYHIP	Q92561	330 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SLC38A4	Q969I6	547 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MRGPRF	Q96AM1	343 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MIB2	Q96AX9	1013 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	C3orf49	Q96BT1	292 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HAVCR1	Q96D42	359 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF347	Q96SE7	839 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	EPYC	Q99645	322 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TIMP4	Q99727	224 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	KLHDC3	Q9BQ90	382 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF416	Q9BWM5	594 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PRRG3	Q9BZD7	231 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	AMBRA1	Q9C0C7	1298 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TP63	Q9H3D4	680 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TMEM185B	Q9H7F4	350 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	AUNIP	Q9H7T9	357 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SMURF1	Q9HCE7	757 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MYOZ1	Q9NP98	299 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ABCB10	Q9NRK6	738 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SPRR3	Q9UBC9	169 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	RIMS3	Q9UJD0	308 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	RALY	Q9UKM9	306 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MCTS1	Q9ULC4	181 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SLC7A7	Q9UM01	511 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	OSGIN2	Q9Y236	505 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	STARD10	Q9Y365	291 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ENPP4	Q9Y6X5	453 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ACACB	O00763	2458 aa		5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MAP1B	P46821	2468 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A087WUJ7	227 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A0B4J2E0	115 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A1B0GUH1	482 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A1B0GX12	115 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638		A0A1W2PPV4	95 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TCRBV5S2	A0A599	114 aa		5.49	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TUBAL3	A6NHL2	446 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms