RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 YARS2Q9Y2Z4 477 aaKnown RBP3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMED7Q9Y3B3 224 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF337Q9Y3M9 751 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPL36Q9Y3U8 105 aaKnown RBP3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 WIF1Q9Y5W5 379 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 SPIN1Q9Y657 262 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 EML6Q6ZMW3 1958 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 GON4LQ3T8J9 2241 aa3.37□□□□□ -1.87
HMGB3P20-201ENST00000417997 HEATR5AQ86XA9 2040 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRAV36DV7A0A075B6V5 113 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 IGHV4OR15-8A0A075B7B6 117 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 A0A1W2PQ72 361 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM72A0PK05 275 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRIM64A6NGJ6 449 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRIM64CA6NLI5 447 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 E9PQ18 207 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 CDC42EP2O14613 210 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SURF4O15260 269 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 HSPA12AO43301 675 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRKYO43930 277 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 FADS1O60427 444 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ENTPD6O75354 484 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TRMUO75648 421 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 CLDN14O95500 239 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MT-ATP6P00846 226 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 P04436 131 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TFAP2AP05549 437 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 STSP08842 583 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 HTR1AP08908 422 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ADORA3P0DMS8 318 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LIPCP11150 499 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PIPP12273 146 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GABRB1P18505 474 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 CD53P19397 219 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 CSRP1P21291 193 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ITGA3P26006 1051 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC1A3P43003 542 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPS5P46782 204 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MLF1P58340 268 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PRPS1P60891 318 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 OC90Q02509 493 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LGALS3BPQ08380 585 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ARL16Q0P5N6 197 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 FOXF1Q12946 379 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 CHAF1BQ13112 559 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ITGADQ13349 1161 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PMS2P3Q13401 168 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TOMM20Q15388 145 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MED22Q15528 200 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TBCEQ15813 527 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF74Q16587 644 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 KRTAP24-1Q3LI83 254 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ANKDD1AQ495B1 522 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 KLHL12Q53G59 568 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ESCO2Q56NI9 601 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SYT14P1Q58G82 188 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ARMC4Q5T2S8 1044 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPR107Q5VW38 600 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 NXNL2Q5VZ03 156 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 AP1ARQ63HQ0 302 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR5M10Q6IEU7 315 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LAIR2Q6ISS4 152 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ACSM5Q6NUN0 579 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 C3orf33Q6P1S2 294 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 PLBD1Q6P4A8 553 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 MEX3BQ6ZN04 569 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 C9orf139Q6ZV77 190 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TUBA1AQ71U36 451 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC46A3Q7Z3Q1 461 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TBC1D26Q86UD7 250 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 RPS19BP1Q86WX3 136 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPALPP1Q8IXQ4 340 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LSM14AQ8ND56 463 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SDR9C7Q8NEX9 313 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ATP6V1C2Q8NEY4 427 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GJC3Q8NFK1 279 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR10G3Q8NGC4 313 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 OR9Q1Q8NGQ5 310 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 RHOXF1Q8NHV9 184 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF420Q8TAQ5 688 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SGCDQ92629 289 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GGHQ92820 318 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ERGIC1Q969X5 290 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SLC25A36Q96CQ1 311 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 DDIT4LQ96D03 193 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TMEM80Q96HE8 168 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 LRR1Q96L50 414 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 IMMP1LQ96LU5 166 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 FER1L6-AS2Q96M78 137 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ZNF582Q96NG8 517 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 IP6K3Q96PC2 410 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 ERMAPQ96PL5 475 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 SECISBP2Q96T21 854 aaKnown RBP3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 TSC22D3Q99576 134 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 GPA33Q99795 319 aa3.36□□□□□ -1.87
HMGB3P20-201ENST00000417997 RHNO1Q9BSD3 238 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms