RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 TRIQKQ629K1 86 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 UBQLNLQ8IYU4 475 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 OR2V1Q8NHB1 315 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 TMEM54Q969K7 222 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 PPP1R14AQ96A00 147 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 PNPLA2Q96AD5 504 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 CACNA1CQ13936 2221 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 A0A0B4J203 849 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 TMEM269A0A1B0GVZ9 245 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 SPNP16150 400 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 STARP49675 285 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 HES5Q5TA89 166 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 KLHL24Q6TFL4 600 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 CCBE1Q6UXH8 406 aaPredicted RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 SULF2Q8IWU5 870 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 GALNT16Q8N428 558 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 GDF2Q9UK05 429 aaPredicted RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 OR52A1Q9UKL2 312 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 DHDHQ9UQ10 334 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 LHFPL6Q9Y693 200 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 CDK2AP1O14519 115 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 DCTDP32321 178 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 GUCA1AP43080 201 aaPredicted RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 PITPNBP48739 271 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 GFRA1P56159 465 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 ASAH1Q13510 395 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 ZNF704Q6ZNC4 412 aaPredicted RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 LRRTM1Q86UE6 522 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 C19orf18Q8NEA5 215 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 INTS12Q96CB8 462 aaKnown RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 CMTM3Q96MX0 182 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 MRI1Q9BV20 369 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 HES7Q9BYE0 225 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 ZNF703Q9H7S9 590 aaPredicted RBP16.82■□□□□ 0.28
USP39-202ENST00000409025 G6PC2Q9NQR9 355 aa16.82■□□□□ 0.28
USP39-202ENST00000409025 CFAP54Q96N23 3096 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 A0A0G2JMP0 313 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 A0A0X1KG70 313 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 LINC00854A0A1B0GVQ3 168 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 CXCL13O43927 109 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 NBL1P41271 181 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 SUCLG1P53597 346 aaKnown RBP16.81■□□□□ 0.28
USP39-202ENST00000409025 C10orf128Q5T292 105 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 PDSS1Q5T2R2 415 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 ATP1A1-AS1Q5TC04 95 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 TMEM123Q8N131 208 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 ZIC4Q8N9L1 334 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 OR4M2Q8NGB6 313 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 OR10D3Q8NH80 312 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 LGALS14Q8TCE9 139 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 ADGRG7Q96K78 797 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 KCNJ15Q99712 375 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 ASCL3Q9NQ33 180 aa16.81■□□□□ 0.28
USP39-202ENST00000409025 TRAV8-7A0A075B6U6 113 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ARGFXA6NJG6 315 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ANXA2P2A6NMY6 339 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 HLA-DQB1P01920 261 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 MAS1P04201 325 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 HPNP05981 417 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ANXA2P07355 339 aaKnown RBP16.8■□□□□ 0.28
USP39-202ENST00000409025 CSRP1P21291 193 aaKnown RBP16.8■□□□□ 0.28
USP39-202ENST00000409025 MMP16P51512 607 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ZNF133P52736 654 aaPredicted RBP16.8■□□□□ 0.28
USP39-202ENST00000409025 RRADP55042 308 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 BCL2L15Q5TBC7 163 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 CFAP77Q6ZQR2 320 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 AGAP4Q96P64 663 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 HHLA2Q9UM44 414 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 CLEC4AQ9UMR7 237 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ZNF878C9JN71 531 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 SLC43A1O75387 559 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ISG15P05161 165 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 CD2P06729 351 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 LIPCP11150 499 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ADRA2CP18825 462 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ACHEP22303 614 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 UBE2NLQ5JXB2 153 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 PYHIN1Q6K0P9 492 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 RHOUQ7L0Q8 258 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 OR10S1Q8NGN2 331 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 SLC22A4Q9H015 551 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 ASH2LQ9UBL3 628 aa16.8■□□□□ 0.28
USP39-202ENST00000409025 KLF13Q9Y2Y9 288 aaPredicted RBP16.8■□□□□ 0.28
USP39-202ENST00000409025 OR5H15A6NDH6 313 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 SP1P08047 785 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 UBCP0CG48 685 aaKnown RBP16.79■□□□□ 0.28
USP39-202ENST00000409025 RFC3P40938 356 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 INPP1P49441 399 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 SELENOPP49908 381 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 LSM6P62312 80 aaKnown RBP16.79■□□□□ 0.28
USP39-202ENST00000409025 TAF13Q15543 124 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 SGCAQ16586 387 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 PHYHD1Q5SRE7 291 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 TMEM244Q5VVB8 128 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 SLC25A25Q6KCM7 469 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 NRARPQ7Z6K4 114 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 DTX3Q8N9I9 347 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 ASB5Q8WWX0 329 aa16.79■□□□□ 0.28
USP39-202ENST00000409025 WACQ9BTA9 647 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms