RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TEX101Q9BY14 249 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 TBC1D29Q9UFV1 150 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 MRM2Q9UI43 246 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 VSIG4Q9Y279 399 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CFAP54Q96N23 3096 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 WRBO00258 174 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 PI3P19957 117 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 C5AR1P21730 350 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 EMDP50402 254 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 DCDP81605 110 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 RNASE10Q5GAN6 216 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF776Q68DI1 518 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 PPP1R3BQ86XI6 285 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SKA3Q8IX90 412 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 BHLHE23Q8NDY6 225 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CMBLQ96DG6 245 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF681Q96N22 645 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 NECAB3Q96P71 396 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SMIM3Q9BZL3 60 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 FN3KRPQ9HA64 309 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 MMP26Q9NRE1 261 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 RCC2Q9P258 522 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 ATXN7L1Q9ULK2 861 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SLC22A13Q9Y226 551 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 KIAA1549LQ6ZVL6 1849 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 LRP3O75074 770 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF432O94892 652 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 YIF1AO95070 293 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ERCC1P07992 297 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ADPRHP54922 357 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF345Q14585 488 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 SLC9A3R2Q15599 337 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ARHGAP11BQ3KRB8 267 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 OR10G6Q8NH81 332 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 SEH1LQ96EE3 360 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ACKR4Q9NPB9 350 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 MRPS33Q9Y291 106 aaKnown RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ASCC3Q8N3C0 2202 aaKnown RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 TMEM35AQ53FP2 167 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 GLYATL3Q5SZD4 288 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF813Q6ZN06 617 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 ADAD2Q8NCV1 583 aaKnown RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 CD300LFQ8TDQ1 290 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 GPR148Q8TDV2 347 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 IP6K3Q96PC2 410 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 TGIF2Q9GZN2 237 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 CHRNA9Q9UGM1 479 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 COL4A3Q01955 1670 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 MSGN1A6NI15 193 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 PRKNO60260 465 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 CD8AP01732 235 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 PSMB6P28072 239 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 CEBPGP53567 150 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 PARGQ86W56 976 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 PHYHIPQ92561 330 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 SLC25A21Q9BQT8 299 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 APOOQ9BUR5 198 aa15.42■□□□□ 0.06
PTPRA-205ENST00000399903 MKKSQ9NPJ1 570 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-205ENST00000399903 COL6A3P12111 3177 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 MED19A0JLT2 244 aaPredicted RBP15.41■□□□□ 0.06
PTPRA-205ENST00000399903 PMS2P1A4D2B8 440 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 C9JQL5 133 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 ITGA3P26006 1051 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 RAB28P51157 221 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 SPOCK1Q08629 439 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 RNF212Q495C1 297 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 VWA2Q5GFL6 755 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 NPEPL1Q8NDH3 523 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF417Q8TAU3 575 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 RRNAD1Q96FB5 475 aaKnown RBP15.41■□□□□ 0.06
PTPRA-205ENST00000399903 IGHV2-70P01814 119 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 IFNA6P05013 189 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 RCC1P18754 421 aaPredicted RBP15.41■□□□□ 0.06
PTPRA-205ENST00000399903 RPS21P63220 83 aaKnown RBP15.41■□□□□ 0.06
PTPRA-205ENST00000399903 MOGAT2Q3SYC2 334 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF561Q8N587 486 aa15.41■□□□□ 0.06
PTPRA-205ENST00000399903 MPDZO75970 2070 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
PTPRA-205ENST00000399903 CDKN2AP42771 156 aaKnown RBP15.4■□□□□ 0.06
PTPRA-205ENST00000399903 SGCAQ16586 387 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 OR2G2Q8NGZ5 317 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 OR1E3Q8WZA6 343 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 MRI1Q9BV20 369 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 RGCCQ9H4X1 137 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 WDR76Q9H967 626 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 CLEC1BQ9P126 229 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 DCTN6O00399 190 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 ACTR1BP42025 376 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 ACTR1AP61163 376 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF425Q6IV72 752 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 CDPF1Q6NVV7 123 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 OR13C8Q8NGS7 320 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 TMEM74BQ9NUR3 256 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 A0A1W2PQF6 199 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 UBE2CO00762 179 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 GATCO43716 136 aaKnown RBP15.4■□□□□ 0.06
PTPRA-205ENST00000399903 ADAP1O75689 374 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 LYPD3O95274 346 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 ADH1BP00325 375 aa15.4■□□□□ 0.06
PTPRA-205ENST00000399903 NTSR1P30989 418 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms