RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TIMM50Q3ZCQ8 353 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SLC36A2Q495M3 483 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ZNF813Q6ZN06 617 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 BEND4Q6ZU67 534 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 SLC16A14Q7RTX9 510 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 RPL3LQ92901 407 aaKnown RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 OR8B4Q96RC9 309 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 DCUN1D5Q9BTE7 237 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ABHD6Q9BV23 337 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ZNF416Q9BWM5 594 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 NIPAL2Q9H841 368 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 E9PLN8 166 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SLC22A1O15245 554 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 IL18BPO95998 194 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 GLI4P10075 376 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 B4GALT1P15291 398 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 PAX7P23759 505 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 GADD45AP24522 165 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 RIDAP52758 137 aaKnown RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 LSAMPQ13449 338 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SPCS2Q15005 226 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 P2RY6Q15077 328 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 PCSK4Q6UW60 755 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SEM1Q6ZVN7 128 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 YIPF7Q8N8F6 280 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SMAP2Q8WU79 429 aaPredicted RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 NANOS1Q8WY41 292 aaKnown RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 NABP1Q96AH0 204 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 VKORC1Q9BQB6 163 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 PIGMQ9H3S5 423 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 EMC7Q9NPA0 242 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 ZNF629Q9UEG4 869 aaPredicted RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 GDF2Q9UK05 429 aaPredicted RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 TNFSF13O75888 250 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 APOC1P02654 83 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 CPEP16870 476 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 CD53P19397 219 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 PSMA1P25786 263 aaKnown RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 DCTDP32321 178 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 OR12D2P58182 307 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 TAF13Q15543 124 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 TRAM1Q15629 374 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 OR7E24Q6IFN5 339 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 KLHL24Q6TFL4 600 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 KLBQ86Z14 1044 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 ST7LQ8TDW4 575 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 RNF133Q8WVZ7 376 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 ZNF837Q96EG3 531 aaPredicted RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 ISG20L2Q9H9L3 353 aaKnown RBP12.03□□□□□ -0.48
VAPB-202ENST00000395802 NDUFB11Q9NX14 153 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 PRSS50Q9UI38 385 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 TIMM10BQ9Y5J6 103 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 LHFPL6Q9Y693 200 aa12.03□□□□□ -0.48
VAPB-202ENST00000395802 AIREO43918 545 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 H2BFMP0C1H6 154 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 RPS27P42677 84 aaKnown RBP12.02□□□□□ -0.48
VAPB-202ENST00000395802 TGM4P49221 684 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 VBP1P61758 197 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 NCS1P62166 190 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.48
VAPB-202ENST00000395802 GRB2P62993 217 aaKnown RBP12.02□□□□□ -0.48
VAPB-202ENST00000395802 ARF1P84077 181 aaKnown RBP12.02□□□□□ -0.48
VAPB-202ENST00000395802 PMPCAQ10713 525 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 ECH1Q13011 328 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 TPBGQ13641 420 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 TP53I3Q53FA7 332 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 ZNF684Q5T5D7 378 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 LINGO2Q7L985 606 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 SSX6Q7RTT6 188 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 C1orf162Q8NEQ5 155 aaPredicted RBP12.02□□□□□ -0.48
VAPB-202ENST00000395802 STARD4Q96DR4 205 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 SLAMF6Q96DU3 332 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 DOCK7Q96N67 2140 aa12.02□□□□□ -0.48
VAPB-202ENST00000395802 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 DVL2O14641 736 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 TOXO94900 526 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 LALBAP00709 142 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 HSD11B1P28845 292 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 HOXC12P31275 282 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 FOXF2Q12947 444 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 ZNF829Q3KNS6 432 aaPredicted RBP12.02□□□□□ -0.49
VAPB-202ENST00000395802 LIPNQ5VXI9 398 aa12.02□□□□□ -0.49
VAPB-202ENST00000395802 VWA1Q6PCB0 445 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms