RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TMPRSS11FQ6ZWK6 438 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 RNF113BQ8IZP6 322 aaKnown RBP14.05□□□□□ -0.16
PTPRK-208ENST00000392449 FNDC8Q8TC99 324 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ELMOD3Q96FG2 381 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ZNF570Q96NI8 536 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 GAL3ST1Q99999 423 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 KCTD14Q9BQ13 255 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-208ENST00000392449 TMPRSS13Q9BYE2 586 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 UBAP1Q9NZ09 502 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 KLHL21Q9UJP4 597 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 AP3M1Q9Y2T2 418 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ENPP4Q9Y6X5 453 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 PRSS37A4D1T9 235 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 TIMM8AO60220 97 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-208ENST00000392449 GPANK1O95872 356 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 MDH1P40925 334 aaKnown RBP14.04□□□□□ -0.16
PTPRK-208ENST00000392449 FXYD6P3P58550 94 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 SEC23BQ15437 767 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 C1orf94Q6P1W5 598 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 RAB1CQ92928 201 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 RAB39BQ96DA2 213 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 HOPXQ9BPY8 73 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-208ENST00000392449 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 EFCAB1Q9HAE3 211 aa14.04□□□□□ -0.16
PTPRK-208ENST00000392449 DYSFO75923 2080 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 TRBV4-1A0A0J9YWV2 114 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 SOCS2O14508 198 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 XKRYO14609 159 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 SLC16A7O60669 478 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 EPHA1P21709 976 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 LIMS1P48059 325 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 LCN2P80188 198 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 KRR1Q13601 381 aaKnown RBP14.03□□□□□ -0.16
PTPRK-208ENST00000392449 ANKDD1AQ495B1 522 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 UNQ6126/PRO20091Q6UXV3 157 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 Q6ZR03 302 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 PTCHD4Q6ZW05 846 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 VASH1Q7L8A9 365 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-208ENST00000392449 RNF148Q8N7C7 305 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 TIMD4Q96H15 378 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 DCLRE1CQ96SD1 692 aaKnown RBP14.03□□□□□ -0.16
PTPRK-208ENST00000392449 ELOVL3Q9HB03 270 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 NDUFAF4Q9P032 175 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 NDRG4Q9ULP0 352 aaKnown RBP14.03□□□□□ -0.16
PTPRK-208ENST00000392449 SIGLEC7Q9Y286 467 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 COA3Q9Y2R0 106 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-208ENST00000392449 STARD10Q9Y365 291 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 V9GYQ6 96 aa14.03□□□□□ -0.16
PTPRK-208ENST00000392449 SGCEO43556 437 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 CCDC22O60826 627 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 PTP4A3O75365 173 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 H1F0P07305 194 aaKnown RBP14.02□□□□□ -0.16
PTPRK-208ENST00000392449 DBHP09172 617 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 ANPEPP15144 967 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 OMPP47874 163 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 ARHGDIAP52565 204 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 PSME3P61289 254 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 TNFAIP6P98066 277 aaPredicted RBP14.02□□□□□ -0.16
PTPRK-208ENST00000392449 MTX3Q5HYI7 312 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 RRM2BQ7LG56 351 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.02□□□□□ -0.16
PTPRK-208ENST00000392449 SYT9Q86SS6 491 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 CYP4Z1Q86W10 505 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 FAM156AQ8NDB6 213 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 OR52J3Q8NH60 311 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 GPA33Q99795 319 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 EGLN1Q9GZT9 426 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 ABCD2Q9UBJ2 740 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 ASH2LQ9UBL3 628 aa14.02□□□□□ -0.16
PTPRK-208ENST00000392449 PURGQ9UJV8 347 aaKnown RBP14.02□□□□□ -0.16
PTPRK-208ENST00000392449 A0A0G2JMP0 313 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 A0A0X1KG70 313 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 NDUFB2O95178 105 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 ADH4P08319 380 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 ZFP36P26651 326 aaKnown RBP14.01□□□□□ -0.17
PTPRK-208ENST00000392449 SCRN3Q0VDG4 424 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 MEP1BQ16820 701 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 DCAF12L2Q5VW00 463 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 HACD2Q6Y1H2 254 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 OR2Z1Q8NG97 314 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 OR4M2Q8NGB6 313 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 CMBLQ96DG6 245 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 RSRC1Q96IZ7 334 aaKnown RBP14.01□□□□□ -0.17
PTPRK-208ENST00000392449 TSSK2Q96PF2 358 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 CYSLTR2Q9NS75 346 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 PLEK2Q9NYT0 353 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 ZDHHC8Q9ULC8 765 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 TMEM5Q9Y2B1 443 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 IER3IP1Q9Y5U9 82 aa14.01□□□□□ -0.17
PTPRK-208ENST00000392449 A0A1W2PRQ8 180 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 H3BSA7 217 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 DCTN6O00399 190 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 RER1O15258 196 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 CD55P08174 381 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 SBK2P0C263 348 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 GSTM3P21266 225 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 SDHAP31040 664 aa14□□□□□ -0.17
PTPRK-208ENST00000392449 CDKN2AP42771 156 aaKnown RBP14□□□□□ -0.17
PTPRK-208ENST00000392449 CDK5R2Q13319 367 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms