RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 DSCR4P56555 118 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 MLF1P58340 268 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 CLRN1P58418 232 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 CHAF1BQ13112 559 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 TOMM20Q15388 145 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ZFP69Q49AA0 526 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 TMEM244Q5VVB8 128 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 OR7E24Q6IFN5 339 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 RHOUQ7L0Q8 258 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 KRT74Q7RTS7 529 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 TMPRSS12Q86WS5 348 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 RPS19BP1Q86WX3 136 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 KDM8Q8N371 416 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 OR11G2Q8NGC1 345 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 OR6X1Q8NH79 312 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ST7LQ8TDW4 575 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 RHBDD1Q8TEB9 315 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 UBASH3BQ8TF42 649 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 UPRTQ96BW1 309 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ORAI1Q96D31 301 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC25A44Q96H78 314 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ZFP3Q96NJ6 502 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 OR5B2Q96R09 309 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 SMAD5Q99717 465 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 TRAF4Q9BUZ4 470 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 MRPL13Q9BYD1 178 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 SH2D2AQ9NP31 389 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC17A5Q9NRA2 495 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 MED29Q9NX70 200 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 OR5V1Q9UGF6 321 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 HHLA2Q9UM44 414 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 CLEC4AQ9UMR7 237 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ALG5Q9Y673 324 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 A0A1B0GTH9 108 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 MEGF11A6BM72 1044 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 TLX3O43711 291 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 TRAF3IP2O43734 574 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 KRT33AO76009 404 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 H2BFMP0C1H6 154 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 GSTT2BP0CG30 244 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 UBCP0CG48 685 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 ARSBP15848 533 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 BTCP35070 178 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 MAGEB1P43366 347 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 DGCR2P98153 550 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 FMODQ06828 376 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 LINGO2Q7L985 606 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 DCXRQ7Z4W1 244 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 SYNPRQ8TBG9 265 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 RNF133Q8WVZ7 376 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF486Q96H40 463 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 TMEM41AQ96HV5 264 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 SGCZQ96LD1 299 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 FOXN4Q96NZ1 517 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 DDA1Q9BW61 102 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 ACTR6Q9GZN1 396 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 CDCP1Q9H5V8 836 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 NIPAL2Q9H841 368 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 MOB1AQ9H8S9 216 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 HPF1Q9NWY4 346 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 PADI1Q9ULC6 663 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 MRPS7Q9Y2R9 242 aaKnown RBP9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 LOXL2Q9Y4K0 774 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 KALRNO60229 2985 aa9.34□□□□□ -0.91
POLR2J3-201ENST00000379340 TRAV8-7A0A075B6U6 113 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A1B0GVC2 190 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 A6NIN4 97 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ACOT7O00154 380 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SULT2B1O00204 365 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 SLC17A2O00624 439 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 STK17BO94768 372 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 VAMP5O95183 116 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 PNPP00491 289 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 HPP00738 406 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 MAS1P04201 325 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CD3GP09693 182 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 PGA4P0DJD7 388 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 PGA3P0DJD8 388 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 CD37P11049 281 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 LIFP15018 202 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF43P17038 809 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 GDNFP39905 211 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 MMP16P51512 607 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 MFGE8Q08431 387 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 KLF9Q13886 244 aaPredicted RBP9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 RAB11BQ15907 218 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 KCNMB1Q16558 191 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM69Q5SWH9 247 aa9.33□□□□□ -0.92
POLR2J3-201ENST00000379340 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms