RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MMP16P51512 607 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 TMEM69Q5SWH9 247 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 LRFN4Q6PJG9 635 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 FCAMRQ8WWV6 532 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 SLAMF6Q96DU3 332 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF275Q9NSD4 429 aaPredicted RBP14.87□□□□□ -0.03
SAMM50-201ENST00000350028 CENPMQ9NSP4 180 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 CYB5R1Q9UHQ9 305 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 DKKL1Q9UK85 242 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 FBXL3Q9UKT7 428 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 CDV3Q9UKY7 258 aaKnown RBP14.87□□□□□ -0.03
SAMM50-201ENST00000350028 R4GN57 208 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 KIF26BQ2KJY2 2108 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 A0A1W2PPL8 197 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 LNP1A1A4G5 178 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF814B7Z6K7 855 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 SLC17A2O00624 439 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 ZIC3O60481 467 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 RAD1O60671 282 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 EIF1BO60739 113 aaKnown RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 UBCP0CG48 685 aaKnown RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 CD37P11049 281 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 NR2C1P13056 603 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF17P17021 662 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 IGFBP3P17936 291 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 AP3S2P59780 193 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 SNTB2Q13425 540 aaKnown RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 PLA2G2CQ5R387 149 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 GLT8D1Q68CQ7 371 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 KLHL24Q6TFL4 600 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 TIPARPQ7Z3E1 657 aaKnown RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 SERPINA12Q8IW75 414 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 GNRHR2Q96P88 292 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 NAA11Q9BSU3 229 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 A8MV72 311 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 TCRBP04435 133 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 GSTT2BP0CG30 244 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 CDK2P24941 298 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 NKX2-5P52952 324 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-201ENST00000350028 RAB25P57735 213 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 RAB11BQ15907 218 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 KCNMB1Q16558 191 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 HIST3H3Q16695 136 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 STPG1Q5TH74 334 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 H3F3CQ6NXT2 135 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 CORO6Q6QEF8 472 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 CACNG6Q9BXT2 260 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 OR2B2Q9GZK3 357 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 AUNIPQ9H7T9 357 aa14.86□□□□□ -0.03
SAMM50-201ENST00000350028 OR2M5A3KFT3 312 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 NAP1L6A6NFF2 107 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 H0YC42 278 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 VAMP5O95183 116 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 JMJD7P0C870 316 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 DNASE1L1P49184 302 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RAG2P55895 527 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 TAS2R20P59543 309 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RRAS2P62070 204 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RPS18P62269 152 aaKnown RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 H3F3AP84243 136 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 BCL2L15Q5TBC7 163 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RAET1LQ5VY80 246 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 FAM166AQ6J272 317 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RHOUQ7L0Q8 258 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 TCTE3Q8IZS6 198 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 OR13C3Q8NGS6 347 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 OR2AJ1Q8NGZ0 328 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 OR52I2Q8NH67 350 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 LIN37Q96GY3 246 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 JSRP1Q96MG2 331 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 SPRY4Q9C004 299 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 NIPAL2Q9H841 368 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 SEC61A2Q9H9S3 476 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RANGRFQ9HD47 186 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 SLC17A5Q9NRA2 495 aa14.85□□□□□ -0.03
SAMM50-201ENST00000350028 RBMX2Q9Y388 322 aaKnown RBP14.85□□□□□ -0.03
SAMM50-201ENST00000350028 LOC107986453A0A1B0GWG9 222 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 ACOT7O00154 380 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 XRCC3O43542 346 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 RAMP1O60894 148 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 GLSO94925 669 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-201ENST00000350028 P04436 131 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 CD59P13987 128 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 GIFP27352 417 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 RPS15P62841 145 aaKnown RBP14.84□□□□□ -0.03
SAMM50-201ENST00000350028 RAC1P63000 192 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 CSNK2A1P68400 391 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-201ENST00000350028 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 CARD17Q5XLA6 110 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 ASPHD2Q6ICH7 369 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 BTN2A1Q7KYR7 527 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 OR51D1Q8NGF3 324 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 AKAP1Q92667 903 aaKnown RBP eCLIP14.84□□□□□ -0.03
SAMM50-201ENST00000350028 PIGQQ9BRB3 760 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 DIABLOQ9NR28 239 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 FAM206AQ9NX38 181 aa14.84□□□□□ -0.03
SAMM50-201ENST00000350028 TAS2R4Q9NYW5 299 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms