RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 NPEPL1Q8NDH3 523 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 POM121L2Q96KW2 1035 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 CDADC1Q9BWV3 514 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 FN3KQ9H479 309 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 ELOVL3Q9HB03 270 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 ARFGEF3Q5TH69 2177 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 M0R233 179 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 GAAP10253 952 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 ZNF823P16415 610 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 CCNIQ14094 377 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 ATP6AP1Q15904 470 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 SLC27A4Q6P1M0 643 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 HIPK1Q86Z02 1210 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 CYB561A3Q8NBI2 242 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 GJC3Q8NFK1 279 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 OR2AJ1Q8NGZ0 328 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 OR5K1Q8NHB7 308 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 C18orf12Q96KH6 178 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 SYT3Q9BQG1 590 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 RHNO1Q9BSD3 238 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 MRPL37Q9BZE1 423 aaKnown RBP16.53■□□□□ 0.24
SYNE4-202ENST00000340477 DUSP13Q9UII6 198 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 KCNG2Q9UJ96 466 aa16.53■□□□□ 0.24
SYNE4-202ENST00000340477 H7C1Q1 480 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 DCTN6O00399 190 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SYNGR3O43761 229 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 NDUFS7O75251 213 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 MPZL1O95297 269 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 ABHD16AO95870 558 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SCG5P05408 212 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 IGFBP1P08833 259 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-202ENST00000340477 OSMP13725 252 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 PAICSP22234 425 aaKnown RBP16.52■□□□□ 0.24
SYNE4-202ENST00000340477 GRK5P34947 590 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 KLF3P57682 345 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-202ENST00000340477 TEKQ02763 1124 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 MOGQ16653 247 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 HS3ST5Q8IZT8 346 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SLC37A3Q8NCC5 494 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SLC26A10Q8NG04 563 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 OR1J1Q8NGS3 322 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 OR4Q3Q8NH05 313 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 ABHD4Q8TB40 342 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SYNPRQ8TBG9 265 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 SNX33Q8WV41 574 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 DUS3LQ96G46 650 aaKnown RBP16.52■□□□□ 0.24
SYNE4-202ENST00000340477 HDHD2Q9H0R4 259 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 MYOZ1Q9NP98 299 aaPredicted RBP16.52■□□□□ 0.24
SYNE4-202ENST00000340477 ATPIF1Q9UII2 106 aa16.52■□□□□ 0.24
SYNE4-202ENST00000340477 LOC100509620A0A075B734 347 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 TRIM64A6NGJ6 449 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 TRIM64BA6NI03 449 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 FAM171A2A8MVW0 826 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 F12P00748 615 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-202ENST00000340477 MT-ND5P03915 603 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 GCH1P30793 250 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 BLVRAP53004 296 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 CRMP1Q14194 572 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 MEP1BQ16820 701 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 NKPD1Q17RQ9 610 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 VASH1Q7L8A9 365 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-202ENST00000340477 ZDHHC13Q8IUH4 622 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 OR1F12Q8NHA8 337 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 UTP4Q969X6 686 aaKnown RBP16.51■□□□□ 0.23
SYNE4-202ENST00000340477 PLEKHA8Q96JA3 519 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 SORCS2Q96PQ0 1159 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 RAB3IPQ96QF0 476 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-202ENST00000340477 DOK1Q99704 481 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 MS4A5Q9H3V2 200 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 PAPOLBQ9NRJ5 636 aaKnown RBP16.51■□□□□ 0.23
SYNE4-202ENST00000340477 CMC2Q9NRP2 79 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 SLCO1C1Q9NYB5 712 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 REV1Q9UBZ9 1251 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 FZR1Q9UM11 496 aa16.51■□□□□ 0.23
SYNE4-202ENST00000340477 VPS13CQ709C8 3753 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 OR6C6A6NF89 314 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 G3V2T6 193 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 GPANK1O95872 356 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 TP53P04637 393 aaPredicted RBP16.5■□□□□ 0.23
SYNE4-202ENST00000340477 HMGN1P05114 100 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 ADRA2AP08913 450 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 INHBBP09529 407 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF23P17027 643 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 PRKACGP22612 351 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 FMO3P31513 532 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 PYCR1P32322 319 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 SLC25A1P53007 311 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 ZNF718Q3SXZ3 478 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 BIVMQ86UB2 503 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 IQCF1Q8N6M8 205 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 OR9Q1Q8NGQ5 310 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 IPCEF1Q8WWN9 437 aaPredicted RBP16.5■□□□□ 0.23
SYNE4-202ENST00000340477 NEU4Q8WWR8 484 aaPredicted RBP16.5■□□□□ 0.23
SYNE4-202ENST00000340477 OTULINQ96BN8 352 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 C4orf45Q96LM5 186 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 COG8Q96MW5 612 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 PRRG3Q9BZD7 231 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 ENOPH1Q9UHY7 261 aa16.5■□□□□ 0.23
SYNE4-202ENST00000340477 TEP1Q99973 2627 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms