RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PHOSPHO1Q8TCT1 267 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 RRNAD1Q96FB5 475 aaKnown RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 SERINC4A6NH21 518 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 APBB3O95704 486 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 CD2P06729 351 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 TGIF1Q15583 401 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 EXOSC6Q5RKV6 272 aaKnown RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 NAA40Q86UY6 237 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 FJX1Q86VR8 437 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 OR9A4Q8NGU2 314 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 TSACCQ96A04 125 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 ANKRD9Q96BM1 317 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 TSPAN32Q96QS1 320 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 KIR3DX1Q9H7L2 352 aa13.23□□□□□ -0.29
COL6A2-202ENST00000310645 CARHSP1Q9Y2V2 147 aaKnown RBP13.23□□□□□ -0.29
COL6A2-202ENST00000310645 FGF16O43320 207 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 OIP5O43482 229 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 IFNA6P05013 189 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 FREM3P0C091 2139 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 CSF2RAP15509 400 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SLC25A1P53007 311 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SCAND1P57086 179 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 RPS4XP62701 263 aaKnown RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 ZNF74Q16587 644 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 CBLN3Q6UW01 205 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SLC25A42Q86VD7 318 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 CSNK1A1LQ8N752 337 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 TM4SF19Q96DZ7 209 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 ZFYVE21Q9BQ24 234 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 RPH3AQ9Y2J0 694 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SERPINA5P05154 406 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 NME2P22392 152 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 HRH1P35367 487 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 MFGE8Q08431 387 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 HABP2Q14520 560 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 NPSR1Q6W5P4 371 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 EXD3Q8N9H8 876 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 TCEAL3Q969E4 200 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SLC25A36Q96CQ1 311 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 CCDC3Q9BQI4 270 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 Q9N2J8 555 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 POLE3Q9NRF9 147 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 MRPS33Q9Y291 106 aaKnown RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 TMEM14AQ9Y6G1 99 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 MSGN1A6NI15 193 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 FGF19O95750 216 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 CRHP06850 196 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PI3P19957 117 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 IGFALSP35858 605 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PARGQ86W56 976 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 MITD1Q8WV92 249 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PRRT1Q99946 306 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SEC11CQ9BY50 192 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SLC17A9Q9BYT1 436 aa13.22□□□□□ -0.29
COL6A2-202ENST00000310645 PARP12Q9H0J9 701 aaKnown RBP13.22□□□□□ -0.29
COL6A2-202ENST00000310645 SEC16AO15027 2179 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 GPR89AB7ZAQ6 455 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 PMP2P02689 132 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 CTSBP07858 339 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 GPR89BP0CG08 455 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 CD80P33681 288 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 SSBP1Q04837 148 aaKnown RBP13.21□□□□□ -0.29
COL6A2-202ENST00000310645 SLC17A1Q14916 467 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 SLC9A3R2Q15599 337 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 CA13Q8N1Q1 262 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 PATE1Q8WXA2 126 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 CTHRC1Q96CG8 243 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 CLCC1Q96S66 551 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 KLHDC3Q9BQ90 382 aa13.21□□□□□ -0.29
COL6A2-202ENST00000310645 POM121BA6NF01 834 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 EFCAB7A8K855 629 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 LMX1BO60663 402 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 ADAP1O75689 374 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 CD74P04233 296 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 MELTFP08582 738 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 SFTA3P0C7M3 94 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 CD79AP11912 226 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 ID4P47928 161 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 EIF2S3LQ2VIR3 472 aaKnown RBP13.21□□□□□ -0.3
COL6A2-202ENST00000310645 ZSCAN4Q8NAM6 433 aaPredicted RBP13.21□□□□□ -0.3
COL6A2-202ENST00000310645 ZNF563Q8TA94 476 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 SLC22A18Q96BI1 424 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 LYRM4Q9HD34 91 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 MMP25Q9NPA2 562 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 MMP26Q9NRE1 261 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.3
COL6A2-202ENST00000310645 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms