RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 RAB3CQ96E17 227 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 TOLLIPQ9H0E2 274 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 BANF2Q9H503 90 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 UFSP2Q9NUQ7 469 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 LRIT1Q9P2V4 623 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 ETV7Q9Y603 341 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 MSGN1A6NI15 193 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 EIF1BO60739 113 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 RDH16O75452 317 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 IFNA2P01563 188 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 EIF1P41567 113 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 PMPCAQ10713 525 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 ZNF542PQ5EBM4 170 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 ANKRD16Q6P6B7 361 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 KIRREL1Q96J84 757 aa14.42□□□□□ -0.1
PRPF40B-201ENST00000261897 C1QTNF3-AMACRE9PGA6 284 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 GREM1O60565 184 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 C1QL1O75973 258 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 ABLIM3O94929 683 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 ZNF205O95201 554 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 QDPRP09417 244 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 ZNF10P21506 573 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 CXCR1P25024 350 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 DUSP8Q13202 625 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 LRP11Q86VZ4 500 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 C17orf78Q8N4C9 275 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 ZNF561Q8N587 486 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 B9D1Q9UPM9 204 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 VSIG4Q9Y279 399 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 CABIN1Q9Y6J0 2220 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 GLCEO94923 617 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 ACRP10323 421 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 OMGP23515 440 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 HSD17B2P37059 387 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 GLP1RP43220 463 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 HABP2Q14520 560 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 HNF4GQ14541 408 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 WDR38Q5JTN6 314 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 TMPRSS11FQ6ZWK6 438 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 RNASE11Q8TAA1 199 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 TOMM40LQ969M1 308 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 TRMT2BQ96GJ1 504 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 AMELYQ99218 206 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 PRRT1Q99946 306 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 PPIL1Q9Y3C6 166 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 PLXNA4Q9HCM2 1894 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 UMAD1C9J7I0 102 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 OPN1LWP04000 364 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 SLC2A1P11166 492 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 TLE1Q04724 770 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 CHAF1BQ13112 559 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 RUNX2Q13950 521 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 LYG2Q86SG7 212 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 SEH1LQ96EE3 360 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 LCORQ96JN0 433 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 LURAP1Q96LR2 239 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 TCEAL7Q9BRU2 100 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 CRLF2Q9HC73 371 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 GFOD1Q9NXC2 390 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 FREM3P0C091 2139 aa14.41□□□□□ -0.1
PRPF40B-201ENST00000261897 C7orf77A4D0Y5 90 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 CTSAP10619 480 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 ADH5P11766 374 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 EIF2S3P41091 472 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 DHCR24Q15392 516 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 RSU1Q15404 277 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 CLEC12BQ2HXU8 276 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 ARHGAP11BQ3KRB8 267 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 RNF212Q495C1 297 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 AWAT2Q6E213 333 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 OR2A2Q6IF42 318 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 TMEM74BQ9NUR3 256 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 ADAM29Q9UKF5 820 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 J3QRE1 110 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 P2RY10O00398 339 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 HCRTR2O43614 444 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 CLN5O75503 358 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 OR8U9P0C7N5 309 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 ZNF823P16415 610 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 AMY2BP19961 511 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 SERPINA2P20848 420 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 LAP3P28838 519 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 EEF1A1P68104 462 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 RAB32Q13637 225 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 CSRP2Q16527 193 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 SLC25A24Q6NUK1 477 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 PNLDC1Q8NA58 520 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 OR4A4PQ8NGN8 299 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 OR8U1Q8NH10 309 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 OR4K15Q8NH41 348 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 SEC61A2Q9H9S3 476 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 PLEKHA1Q9HB21 404 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 PRRT4C9JH25 899 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 IFNA17P01571 189 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 CT62P0C5K7 136 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 GDI1P31150 447 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 FAM53BQ14153 422 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 UQCC3Q6UW78 93 aa14.4□□□□□ -0.1
PRPF40B-201ENST00000261897 TSACCQ96A04 125 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms