RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ZNF454Q8N9F8 522 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 GJC3Q8NFK1 279 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 OTOSQ8NHW6 89 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 YIPF3Q9GZM5 350 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 ADGRL4Q9HBW9 690 aa12.27□□□□□ -0.45
VPS25-201ENST00000253794 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 OR6C6A6NF89 314 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 J3QRE1 110 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 ZNF593O00488 134 aaPredicted RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 CASKO14936 926 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 SELENOFO60613 162 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 ICMTO60725 284 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 PTHP01270 115 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 SBK2P0C263 348 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 PATE4P0C8F1 98 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 COX6B1P14854 86 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 PTAFRP25105 342 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 MTNR1AP48039 350 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 NR1H2P55055 460 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 CDK5R2Q13319 367 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 RAB35Q15286 201 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 CCDC92Q53HC0 331 aaPredicted RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 PABPC1L2AQ5JQF8 200 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 LAIR2Q6ISS4 152 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 VASH1Q7L8A9 365 aaPredicted RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 DPY19L4Q7Z388 723 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 CDC20BQ86Y33 519 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 ERI1Q8IV48 349 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 ST7LQ8TDW4 575 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 ZC3HAV1LQ96H79 300 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 CNN2Q99439 309 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 TMEM204Q9BSN7 226 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 HDHD2Q9H0R4 259 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 ESRP2Q9H6T0 727 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 PLCXD1Q9NUJ7 323 aa12.26□□□□□ -0.45
VPS25-201ENST00000253794 DDX28Q9NUL7 540 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 GDF2Q9UK05 429 aaPredicted RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 EXOGQ9Y2C4 368 aaKnown RBP12.26□□□□□ -0.45
VPS25-201ENST00000253794 PRR14LQ5THK1 2151 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 A6NNC1 897 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 SGCEO43556 437 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 DENRO43583 198 aaKnown RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 SYNGR3O43761 229 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CECR9P0C854 216 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 DBTP11182 482 aaKnown RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 ALOX5APP20292 161 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CD40P25942 277 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 SLC15A1P46059 708 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 ZNF83P51522 516 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CXCR4P61073 352 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 PLP2Q04941 152 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 ZNF91Q05481 1191 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 PIGFQ07326 219 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 OTPQ5XKR4 325 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 B3GLCTQ6Y288 498 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CFAP77Q6ZQR2 320 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 MYPOPQ86VE0 399 aaPredicted RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 ALDH16A1Q8IZ83 802 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 OR10S1Q8NGN2 331 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 OR2AJ1Q8NGZ0 328 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CNIH3Q8TBE1 160 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 RNF133Q8WVZ7 376 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 C14orf79Q96F83 325 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 MAP6Q96JE9 813 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 COQ7Q99807 217 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 CDADC1Q9BWV3 514 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 RNF121Q9H920 327 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 AASSQ9UDR5 926 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 POLR1DQ9Y2S0 133 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 RPL36Q9Y3U8 105 aaKnown RBP12.25□□□□□ -0.45
VPS25-201ENST00000253794 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
VPS25-201ENST00000253794 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 RER1O15258 196 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 CELA3BP08861 270 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 SPARCP09486 303 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 ZNF35P13682 527 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 OTX1P32242 354 aaPredicted RBP12.24□□□□□ -0.45
VPS25-201ENST00000253794 IDH3GP51553 393 aaPredicted RBP12.24□□□□□ -0.45
VPS25-201ENST00000253794 NAAAQ02083 359 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 RAB40BQ12829 278 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 ECH1Q13011 328 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 RAB39AQ14964 217 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 ELFN2Q5R3F8 820 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 ZNF774Q6NX45 483 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 DCXRQ7Z4W1 244 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 LINC00346Q8IVM7 164 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 OR51G2Q8NGK0 314 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 AKR7LQ8NHP1 331 aa12.24□□□□□ -0.45
VPS25-201ENST00000253794 IPCEF1Q8WWN9 437 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms