RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CELSR2Q9HCU4 2923 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 DNAJC13O75165 2243 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 PKDREJQ9NTG1 2253 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 ACOD1A6NK06 481 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 EIF1AYO14602 144 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 TNFSF11O14788 317 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 CASKO14936 926 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 SMAD9O15198 467 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 SLC43A1O75387 559 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 UPK3AO75631 287 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 APOC1P02654 83 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 UCHL1P09936 223 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 NPR2P20594 1047 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 EDNRAP25101 427 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 RPS19P39019 145 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 LHX2P50458 406 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF84P51523 738 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 BMXP51813 675 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 RNPS1Q15287 305 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 SPANXN2Q5MJ10 180 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 WIPI1Q5MNZ9 446 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 DDI2Q5TDH0 399 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 FAM180AQ6UWF9 173 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 UNQ9370/PRO34162Q6UXP9 181 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM91Q6ZNR0 172 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 GALNTL5Q7Z4T8 443 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 OR10D3Q8NH80 312 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 RNF133Q8WVZ7 376 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 NSMAFQ92636 917 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 TXNDC15Q96J42 360 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 OR2M2Q96R28 347 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 C1orf198Q9H425 327 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 ACOXLQ9NUZ1 547 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 RABL2AQ9UBK7 228 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 CYB5R1Q9UHQ9 305 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 FOXD3Q9UJU5 478 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 ADAM30Q9UKF2 790 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 IKZF2Q9UKS7 526 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 MCTS1Q9ULC4 181 aaKnown RBP11.69□□□□□ -0.54
SLIRP-201ENST00000238688 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 PMF1-BGLAPU3KQ54 211 aa11.69□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF407Q9C0G0 2248 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 TVP23AA6NH52 213 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF724A8MTY0 619 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 PDCD5O14737 125 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 LRRTM2O43300 516 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 CDRT1O95170 752 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 SYNGR4O95473 234 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 SPARCP09486 303 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 FCGR2AP12318 317 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 CPN1P15169 458 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 MMP16P51512 607 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 CLDN17P56750 224 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 CLDN18P56856 261 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 PPIAP62937 165 aaKnown RBP11.68□□□□□ -0.54
SLIRP-201ENST00000238688 PMP22Q01453 160 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ACSM3Q53FZ2 586 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ZMAT1Q5H9K5 638 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 FCRLAQ7L513 359 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 KRT77Q7Z794 578 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 C20orf196Q8IYI0 205 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 GHDCQ8N2G8 530 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 KDM8Q8N371 416 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 SYT14Q8NB59 555 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 OR2G2Q8NGZ5 317 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 OR5AK2Q8NH90 309 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 THEM6Q8WUY1 208 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ITFG2Q969R8 447 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM203Q969S6 136 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ABHD6Q9BV23 337 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 HES7Q9BYE0 225 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 RERGLQ9H628 205 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF175Q9Y473 711 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 FLVCR1Q9Y5Y0 555 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 MED12Q93074 2177 aa11.68□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF716A6NP11 495 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 E9PI62 339 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 LOC110117498-PIK3R3F6TDL0 507 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 IGHG3P01860 377 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ISG15P05161 165 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 MSR1P21757 451 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SDC2P34741 201 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SCAND1P57086 179 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 MRPS34P82930 218 aaKnown RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 SLC3A1Q07837 685 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 CAMK2DQ13557 499 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 EIF2B1Q14232 305 aaKnown RBP11.67□□□□□ -0.54
SLIRP-201ENST00000238688 MEP1BQ16820 701 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 Q499Y3 187 aa11.67□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF787Q6DD87 383 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms