RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PLXDC2Q6UX71 529 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 NLRC3Q7RTR2 1065 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 OR10G3Q8NGC4 313 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 TSLPQ969D9 159 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 SLAMF6Q96DU3 332 aa12.1□□□□□ -0.47
COL1A1-201ENST00000225964 PIAS2O75928 621 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 CCR6P51684 374 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 SIAH3Q8IW03 269 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 PSORS1C1Q9UIG5 152 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 PRRT4C9JH25 899 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 XRCC3O43542 346 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 THBS1P07996 1170 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 CCR5P51681 352 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 THEM4Q5T1C6 240 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 DIMT1Q9UNQ2 313 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 HPNP05981 417 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 TSEN54Q7Z6J9 526 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 ZNRF4Q8WWF5 429 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 NDFIP1Q9BT67 221 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 SLC22A11Q9NSA0 550 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 SLC17A4Q9Y2C5 497 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 CNR1P21554 472 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 ERHP84090 104 aaKnown RBP12.09□□□□□ -0.47
COL1A1-201ENST00000225964 HMGN3Q15651 99 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 LAIR1Q6GTX8 287 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 PRSS45Q7RTY3 260 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 MRGPRX1Q96LB2 322 aa12.09□□□□□ -0.47
COL1A1-201ENST00000225964 ZGLP1P0C6A0 271 aa12.08□□□□□ -0.47
COL1A1-201ENST00000225964 TMEM182Q6ZP80 229 aaPredicted RBP12.08□□□□□ -0.47
COL1A1-201ENST00000225964 CCL4L1Q8NHW4 92 aa12.08□□□□□ -0.47
COL1A1-201ENST00000225964 SOX7Q9BT81 388 aa12.08□□□□□ -0.47
COL1A1-201ENST00000225964 CXCL13O43927 109 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 DUSP1P28562 367 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 SELENBP1Q13228 472 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 RGS7BPQ6MZT1 257 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 BTLAQ7Z6A9 289 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 CA13Q8N1Q1 262 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 OR6K3Q8NGY3 331 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 TNFRSF19Q9NS68 423 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 DAPP1Q9UN19 280 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PSMB1P20618 241 aaKnown RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ACHEP22303 614 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 P2RX3P56373 397 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PPP2CBP62714 309 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PPP2CAP67775 309 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 OPCMLQ14982 345 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 AFMIDQ63HM1 303 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM207Q6UWW9 146 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ADGRG3Q86Y34 549 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 FAM173AQ9BQD7 235 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ACOXLQ9NUZ1 547 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 AQP7P3A6NL99 342 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 CHEK1O14757 476 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 NRASP01111 189 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 T-ENOLP0DO92 83 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 CBR1P16152 277 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 GCAP28676 217 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 RTN4RL1Q86UN2 441 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 HSD17B11Q8NBQ5 300 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 OR2G3Q8NGZ4 309 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PPT2Q9UMR5 302 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 KIR2DS1A0A191URI9 304 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PLRG1O43660 514 aaKnown RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ACKR3P25106 362 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 KIR2DS4P43632 304 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 INSM1Q01101 510 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 SAXO2Q658L1 398 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 TMEM38AQ9H6F2 299 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 KCNG2Q9UJ96 466 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 SPRY3O43610 288 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 PRKNO60260 465 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
COL1A1-201ENST00000225964 IHHQ14623 411 aa12.08□□□□□ -0.48
COL1A1-201ENST00000225964 NKAIN4Q8IVV8 208 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms