RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Taf6Q62311 678 aaKnown RBP13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Alg8Q6P8H8 526 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc30a6Q8BJM5 460 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Lrfn5Q8BXA0 719 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 ScaiQ8C8N2 606 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Amdhd2Q8JZV7 409 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 1700001C19RikQ8K168 210 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gpx6Q91WR8 221 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Lpar2Q9JL06 348 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ch25hQ9Z0F5 298 aa13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 TprF6ZDS4 2431 aaKnown RBP13.31□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cnot1Q6ZQ08 2375 aaKnown RBP13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Aadacl3A2A7Z8 408 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pax7P47239 503 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dgcr2P98154 548 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Taar8cQ5QD05 344 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Adprhl1Q8BGK2 353 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Nhlrc2Q8BZW8 725 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fam221aQ8C790 301 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Angptl8Q8R1L8 198 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr97Q8VFE1 310 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Eif2b2Q99LD9 351 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mrm2Q9CPY0 246 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slamf9Q9D780 285 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Nox4Q9JHI8 578 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Riox1Q9JJF3 603 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cfap46E9Q2C0 2641 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 E030025P04RikA2A6V5 185 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm13078A2AGW8 474 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Lcn11A2BHR2 178 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ttll3A4Q9E5 927 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Zfp989H3BLB0 661 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 NnmtO55239 264 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Atxn2O70305 1285 aaKnown RBP13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Kcnj1O88335 372 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Timp1P12032 205 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ccr1l1P51676 356 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rpl27P61358 136 aaKnown RBP13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc30a2Q2HJ10 371 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr9Q60885 312 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Elavl2Q60899 360 aaKnown RBP13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Il17fQ7TNI7 161 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr270Q7TS19 314 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Acp6Q8BP40 418 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm9999Q8C5Y2 53 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Krtcap3Q8K177 240 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 DhrsxQ8VBZ0 335 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 PpcsQ8VDG5 311 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr820Q8VFU5 312 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Emc6Q9CQW0 110 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ranbp3Q9CT10 491 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Arpc5lQ9D898 153 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Alg2Q9DBE8 415 aa13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 ClpxQ9JHS4 634 aaKnown RBP13.3□□□□□ -0.28
Nup88-202ENSMUST00000108530 Igkv4-63A0A0G2JFU6 117 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Smim18J3QNP2 93 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 A630023A22RikJ3QP60 199 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fcn1O70165 334 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ifi204P0DOV2 619 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pou3f1P21952 449 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 S1pr2P52592 352 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gpbar1Q80SS6 329 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 TxnipQ8BG60 397 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gucd1Q8BZI6 239 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm4922Q8C0N0 497 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Babam2Q8K3W0 383 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Plpp7Q91WB2 271 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc6a19Q9D687 634 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Il21Q9ES17 146 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 SigirrQ9JLZ8 409 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Npas3Q9QZQ0 925 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Skint10A7TZG1 354 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 P01795 144 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 P06321 130 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ptx3P48759 381 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 CtseP70269 397 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ptpmt1Q66GT5 193 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr198Q7TS40 306 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 H2-M10.3Q85ZW6 330 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rnf122Q8BP31 155 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Klhl12Q8BZM0 568 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Rdh16f2Q8K3M1 318 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Ccm2lQ8VCC6 481 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Tspan10Q8VCF5 331 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr214Q8VG27 320 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Idh3bQ91VA7 384 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Pot1Q91WC1 640 aaKnown RBP13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Sectm1aQ921W8 192 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Slc35b3Q922Q5 369 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cadm3Q99N28 396 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Emc4Q9CZX9 183 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Fbxo15Q9QZN0 433 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Apc2Q9Z1K7 2274 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Muc5acE9QAQ8 3455 aa13.29□□□□□ -0.28
Nup88-202ENSMUST00000108530 Gm3696K7N751 203 aa13.28□□□□□ -0.28
Nup88-202ENSMUST00000108530 Mapk14P47811 360 aa13.28□□□□□ -0.28
Nup88-202ENSMUST00000108530 Cdk5r1P61809 307 aa13.28□□□□□ -0.28
Nup88-202ENSMUST00000108530 Dppa5bP85965 119 aa13.28□□□□□ -0.28
Nup88-202ENSMUST00000108530 Malt1Q2TBA3 832 aa13.28□□□□□ -0.28
Nup88-202ENSMUST00000108530 Olfr70Q80ZX9 316 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms