RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 CLIP4Q8N3C7 705 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 ADPRHL1Q8NDY3 354 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 OR4K5Q8NGD3 323 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 ITCHQ96J02 903 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 PLEKHA8Q96JA3 519 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 TEX37Q96LM6 180 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 ELAC2Q9BQ52 826 aaKnown RBP11.51□□□□□ -0.57
SNX1-214ENST00000625244 BTNL2Q9UIR0 455 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 CHST2Q9Y4C5 530 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 IGKV1D-42A0A075B6H8 117 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 A0A087WUJ7 227 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 P2RY10O00398 339 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 CCDC22O60826 627 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 MMP9P14780 707 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 CPT2P23786 658 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 IL12AP29459 219 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 APLNRP35414 380 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 CHI3L1P36222 383 aaPredicted RBP11.5□□□□□ -0.57
SNX1-214ENST00000625244 HOXC5Q00444 222 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 MAPRE2Q15555 327 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 C6orf10Q5SRN2 563 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 LRFN4Q6PJG9 635 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 SLC16A14Q7RTX9 510 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 SERPINA11Q86U17 422 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 RBM15BQ8NDT2 890 aaKnown RBP11.5□□□□□ -0.57
SNX1-214ENST00000625244 OR9I1Q8NGQ6 314 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 OR52P1PQ8NH57 321 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 ITLN1Q8WWA0 313 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 TMEM54Q969K7 222 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 SPDL1Q96EA4 605 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 NEIL1Q96FI4 390 aaPredicted RBP11.5□□□□□ -0.57
SNX1-214ENST00000625244 SLC41A3Q96GZ6 507 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 CCDC115Q96NT0 180 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 TRIM15Q9C019 465 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 DPAGT1Q9H3H5 408 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
SNX1-214ENST00000625244 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 CGGBP1Q9UFW8 167 aaPredicted RBP11.5□□□□□ -0.57
SNX1-214ENST00000625244 MIOXQ9UGB7 285 aa11.5□□□□□ -0.57
SNX1-214ENST00000625244 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 C22orf46C9J442 243 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 C3orf84H3BNL1 204 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 ANGPT2O15123 496 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 SERPINI2O75830 405 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 FARS2O95363 451 aaKnown RBP11.49□□□□□ -0.57
SNX1-214ENST00000625244 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 TNFRSF1AP19438 455 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 PITPNBP48739 271 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 PLP2Q04941 152 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 DOC2BQ14184 412 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 MAPK11Q15759 364 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 SLC36A2Q495M3 483 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 ZMAT1Q5H9K5 638 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 MTX3Q5HYI7 312 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 ZNF621Q6ZSS3 439 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 RFPL4BQ6ZWI9 263 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 NET1Q7Z628 596 aaPredicted RBP11.49□□□□□ -0.57
SNX1-214ENST00000625244 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 OR2Z1Q8NG97 314 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 OR4S1Q8NGB4 309 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 LRTOMTQ8WZ04 291 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 SLC38A4Q969I6 547 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 SLC35A5Q9BS91 424 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 MMP28Q9H239 520 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 A4GALTQ9NPC4 353 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 GLTPQ9NZD2 209 aa11.49□□□□□ -0.57
SNX1-214ENST00000625244 TRAV36DV7A0A075B6V5 113 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 LOC100509620A0A075B734 347 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 TOX4O94842 621 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 KRT75O95678 551 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 MMP7P09237 267 aaPredicted RBP11.48□□□□□ -0.57
SNX1-214ENST00000625244 NR2F1P10589 423 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 IGLL1P15814 213 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 STOMP27105 288 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 GABRA5P31644 462 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 TGFBR2P37173 567 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 MMP16P51512 607 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 BIDP55957 195 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 RUNDC3AQ59EK9 446 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 PABPC1L2AQ5JQF8 200 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 WDR25Q64LD2 544 aaPredicted RBP11.48□□□□□ -0.57
SNX1-214ENST00000625244 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 Q6ZR03 302 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 LHX4Q969G2 390 aa11.48□□□□□ -0.57
SNX1-214ENST00000625244 VPS33AQ96AX1 596 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms