RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SHISA5Q8N114 240 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR52N4Q8NGI2 321 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PIGTQ969N2 578 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ISOC2Q96AB3 205 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FOXN4Q96NZ1 517 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TAAR6Q96RI8 345 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MRIQ9BWK5 157 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HRH4Q9H3N8 390 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC25A19Q9HC21 320 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CBLN4Q9NTU7 201 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 DOK5Q9P104 306 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FBXL4Q9UKA2 621 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLCO1B1Q9Y6L6 691 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3DA0A087WVF3 549 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3IA0A087WXS9 549 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3EA0A087X179 549 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C20orf202A1L168 122 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3LB9A6J9 549 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC28A2O43868 658 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ARG1P05089 322 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C8AP07357 584 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FABP4P15090 132 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CPN1P15169 458 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CEBPBP17676 345 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBPP20226 339 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SERPINA2P20848 420 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 KDELR2P33947 212 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ADRA1AP35348 466 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 POLR2JP52435 117 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HMGCS1Q01581 520 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR5I1Q13606 314 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C18orf21Q32NC0 220 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 NKAIN2Q5VXU1 208 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PLAG1Q6DJT9 500 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3CQ6IPX1 549 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF774Q6NX45 483 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ALKAL1Q6UXT8 129 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF562Q6V9R5 426 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C15orf39Q6ZRI6 1047 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 GAREM2Q75VX8 874 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TBC1D3Q8IZP1 549 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 GPC2Q8N158 579 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TOMM5Q8N4H5 51 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HJURPQ8NCD3 748 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR52B6Q8NGF0 335 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR2L2Q8NH16 312 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MARCH1Q8TCQ1 289 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CXorf40AQ8TE69 158 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ABHD3Q8WU67 409 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR4K3Q96R72 315 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 S100A13Q99584 98 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 NRIP2Q9BQI9 281 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MRPL45Q9BRJ2 306 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FAAP24Q9BTP7 215 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FNDC11Q9BVV2 318 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C20orf85Q9H1P6 137 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SRD5A3Q9H8P0 318 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SEC61A2Q9H9S3 476 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 NMNAT1Q9HAN9 279 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MEPEQ9NQ76 525 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CYSLTR2Q9NS75 346 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CLEC4EQ9ULY5 219 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SAMD4AQ9UPU9 718 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ASF1AQ9Y294 204 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TRBV11-1A0A0K0K1C0 115 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PRSS38A1L453 326 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF749O43361 778 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 EIF4E2O60573 245 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CSO75390 466 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR2A4O95047 310 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 UTS2O95399 124 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ADRA2AP08913 450 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC35E2BP0CK96 405 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF28P17035 718 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MPZP25189 248 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 APLNRP35414 380 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 CAMPP49913 170 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF84P51523 738 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PGGT1BP53609 377 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC16A1P53985 500 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC37A1P57057 533 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 KLF3P57682 345 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SELENOTP62341 195 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZFP36L1Q07352 338 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 AESQ08117 197 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C1DQ13901 141 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 MEF2DQ14814 521 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ATP6AP1LQ52LC2 224 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR2A2Q6IF42 318 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms