RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LOC100509620A0A075B734 347 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 SURF4O15260 269 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 AHCYL1O43865 530 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 SLC2A10O95528 541 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 IGHMP01871 453 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 GSTM3P21266 225 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 CDAP32320 146 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 WNT5AP41221 380 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 CRYBA2P53672 197 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 PPP1CBP62140 327 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 PIN1Q13526 163 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 MTX3Q5HYI7 312 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 FOXL2NBQ6ZUU3 175 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 ZNF101Q8IZC7 436 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 NPEPL1Q8NDH3 523 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 PFN4Q8NHR9 129 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 LRRC58Q96CX6 371 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 C4orf45Q96LM5 186 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 SAMD8Q96LT4 415 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 C20orf141Q9NUB4 165 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 NPTNQ9Y639 398 aa15.1■□□□□ 0.01
SHKBP1-227ENST00000602011 HMGB1P1B2RPK0 211 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 IFNL4K9M1U5 179 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 PRSS23O95084 383 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 FSHBP01225 129 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 MAKP20794 623 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 GLO1Q04760 184 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 CDK5R2Q13319 367 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 RNF113BQ8IZP6 322 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 KLHL36Q8N4N3 616 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 AKR7LQ8NHP1 331 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 MOSPD2Q8NHP6 518 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 ABHD4Q8TB40 342 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 LZICQ8WZA0 190 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 NSMAFQ92636 917 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 BPIFA2Q96DR5 249 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 AP3M1Q9Y2T2 418 aa15.09■□□□□ 0.01
SHKBP1-227ENST00000602011 ISPDA4D126 451 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 BBIP1A8MTZ0 92 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 MSR1P21757 451 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 LAP3P28838 519 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 MPV17P39210 176 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 SLC9A3P48764 834 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 ERVK-25P63136 954 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 MAPRE2Q15555 327 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 PCYOX1LQ8NBM8 494 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 SLC6A7Q99884 636 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 NDEL1Q9GZM8 345 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 WNT5BQ9H1J7 359 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 GID8Q9NWU2 228 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 OPN4Q9UHM6 478 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 CACNG2Q9Y698 323 aa15.08■□□□□ 0
SHKBP1-227ENST00000602011 ZSCAN5BA6NJL1 495 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 J3QW42 95 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 KDELR2P33947 212 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 CTXN1P60606 82 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 UBA52P62987 128 aaKnown RBP15.07■□□□□ 0
SHKBP1-227ENST00000602011 SELENOWP63302 87 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 TNFAIP6P98066 277 aaPredicted RBP15.07■□□□□ 0
SHKBP1-227ENST00000602011 SCRN3Q0VDG4 424 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 AWAT1Q58HT5 328 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 SPATA46Q5T0L3 261 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 SHISA2Q6UWI4 295 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 LRRC28Q86X40 367 aaPredicted RBP15.07■□□□□ 0
SHKBP1-227ENST00000602011 ZDHHC22Q8N966 263 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 FAM156AQ8NDB6 213 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 DVL3Q92997 716 aaPredicted RBP15.07■□□□□ 0
SHKBP1-227ENST00000602011 PRRC1Q96M27 445 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 ZNF583Q96ND8 569 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 ZNF747Q9BV97 191 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 TMEM106BQ9NUM4 274 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 UBAP1Q9NZ09 502 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 IL19Q9UHD0 177 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 NUP50Q9UKX7 468 aa15.07■□□□□ 0
SHKBP1-227ENST00000602011 A0A0G2JND7 137 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 TIMM8AO60220 97 aaPredicted RBP15.06■□□□□ 0
SHKBP1-227ENST00000602011 EDF1O60869 148 aaKnown RBP15.06■□□□□ 0
SHKBP1-227ENST00000602011 ABHD16AO95870 558 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 HKR1P10072 659 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 IFI30P13284 250 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 KITLGP21583 273 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 LCN2P80188 198 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 FMODQ06828 376 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 PSG7Q13046 419 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 TUSC1Q2TAM9 212 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 CYBRD1Q53TN4 286 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 SLC27A4Q6P1M0 643 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 DOK3Q7L591 496 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 OAFQ86UD1 273 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 ZNF283Q8N7M2 679 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 C10orf82Q8WW14 230 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 GTF3AQ92664 365 aaKnown RBP15.06■□□□□ 0
SHKBP1-227ENST00000602011 PATZ1Q9HBE1 687 aaKnown RBP15.06■□□□□ 0
SHKBP1-227ENST00000602011 NPHS2Q9NP85 383 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 PLEK2Q9NYT0 353 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 PURGQ9UJV8 347 aaKnown RBP15.06■□□□□ 0
SHKBP1-227ENST00000602011 AUP1Q9Y679 476 aa15.06■□□□□ 0
SHKBP1-227ENST00000602011 PKD1L1Q8TDX9 2849 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms