RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NELFAQ9H3P2 528 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 CALHM2Q9HA72 323 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 EMC7Q9NPA0 242 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 B3GAT2Q9NPZ5 323 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 SLCO1C1Q9NYB5 712 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 IKZF2Q9UKS7 526 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 CLEC4AQ9UMR7 237 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 LHFPL6Q9Y693 200 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 HSPB2A8KAH6 182 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 WNT11O96014 354 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 EDNRAP25101 427 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 TGM4P49221 684 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 ZNF84P51523 738 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 CDK5R1Q15078 307 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 HSPB2Q16082 182 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 LIPNQ5VXI9 398 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 ZNF324BQ6AW86 544 aaPredicted RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 KCTD18Q6PI47 426 aaPredicted RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 CD200R1LQ6Q8B3 271 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 FAM180AQ6UWF9 173 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 LINGO2Q7L985 606 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 DCXRQ7Z4W1 244 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 FGD2Q7Z6J4 655 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 ZNF679Q8IYX0 411 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 YIPF7Q8N8F6 280 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 RPS4Y2Q8TD47 263 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 HAVCR2Q8TDQ0 301 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 HTRA1Q92743 480 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 TMEM203Q969S6 136 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 NABP1Q96AH0 204 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 TRMT61AQ96FX7 289 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 TM9SF2Q99805 663 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 CDADC1Q9BWV3 514 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 RBM24Q9BX46 236 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 LINC00470Q9BZP3 86 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 CRLF2Q9HC73 371 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 CD53P19397 219 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 MSR1P21757 451 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 TGFBR1P36897 503 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 GUCA1AP43080 201 aaPredicted RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 LSM6P62312 80 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 MRPL28Q13084 256 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 RPL22L1Q6P5R6 122 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 LRRN1Q6UXK5 716 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.35■□□□□ 0.53
PNKP-203ENST00000593946 OR5M9Q8NGP3 310 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 NDNFQ8TB73 568 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 CPT1CQ8TCG5 803 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 DCUN1D5Q9BTE7 237 aa18.35■□□□□ 0.53
PNKP-203ENST00000593946 OR6C65A6NJZ3 312 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 PSMB10P40306 273 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 MRPS34P82930 218 aaKnown RBP18.34■□□□□ 0.53
PNKP-203ENST00000593946 TSPO2Q5TGU0 170 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 CORO6Q6QEF8 472 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 ARL9Q6T311 187 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 SMIM19Q96E16 107 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 TMED9Q9BVK6 235 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 MROQ9BYG7 248 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 RNF167Q9H6Y7 350 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 GPR35Q9HC97 309 aa18.34■□□□□ 0.53
PNKP-203ENST00000593946 AHRRA9YTQ3 701 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 AGTR1P30556 359 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 FABP5Q01469 135 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 KRTCAP3Q53RY4 240 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 RNF133Q8WVZ7 376 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 GMPPAQ96IJ6 420 aaPredicted RBP18.33■□□□□ 0.52
PNKP-203ENST00000593946 MAP6Q96JE9 813 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 TRIB1Q96RU8 372 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 ELOVL3Q9HB03 270 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 EXOSC4Q9NPD3 245 aaKnown RBP18.33■□□□□ 0.52
PNKP-203ENST00000593946 SSR3Q9UNL2 185 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 POLR1DQ9Y2S0 133 aa18.33■□□□□ 0.52
PNKP-203ENST00000593946 RPP14O95059 124 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 HLA-DPB1P04440 258 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 CD1AP06126 327 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 ZNF182P17025 639 aaPredicted RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 NANOS3P60323 173 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 SGCAQ16586 387 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 DEGS2Q6QHC5 323 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 NUFIP2Q7Z417 695 aaKnown RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 P4HA3Q7Z4N8 544 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 KRT77Q7Z794 578 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 HSD17B8Q92506 261 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 APH1AQ96BI3 265 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 COQ7Q99807 217 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 ZNF416Q9BWM5 594 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 C1orf198Q9H425 327 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 GLRX2Q9NS18 164 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 SLC7A10Q9NS82 523 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 TMEM38BQ9NVV0 291 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 ASH2LQ9UBL3 628 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 GDF2Q9UK05 429 aaPredicted RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 LRP12Q9Y561 859 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 TRDV1A0A1B0GX56 115 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 SS18L1O75177 396 aaPredicted RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 GALP22466 123 aa18.32■□□□□ 0.52
PNKP-203ENST00000593946 FGF9P31371 208 aaPredicted RBP18.32■□□□□ 0.52
PNKP-203ENST00000593946 GDI2P50395 445 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms