RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 POM121L2Q96KW2 1035 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 VRK1Q99986 396 aaPredicted RBP16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 NIPSNAP1Q9BPW8 284 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 SYT3Q9BQG1 590 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 C1orf198Q9H425 327 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 FN3KQ9H479 309 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 BARX1Q9HBU1 254 aaPredicted RBP16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 SRA1Q9HD15 236 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 TIMM10BQ9Y5J6 103 aa16.07■□□□□ 0.16
PPP4R1-215ENST00000580182 OR6C68A6NDL8 312 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 VSTM5A8MXK1 200 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 BHLHE40O14503 412 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 GNGT2O14610 69 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 FKBP6O75344 327 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 ATP5HO75947 161 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 SOX14O95416 240 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 TP53P04637 393 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 NOS3P29474 1203 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 APLNRP35414 380 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 CENPAP49450 140 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 CBX1P83916 185 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 GLB1L2Q8IW92 636 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 OR6V1Q8N148 313 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 ZNF525Q8N782 197 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 MAPK1IP1LQ8NDC0 245 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 OR52E2Q8NGJ4 325 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 OR1J2Q8NGS2 313 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 C11orf40Q8WZ69 217 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 DGCR6LQ9BY27 220 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 IL20Q9NYY1 176 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 MYEF2Q9P2K5 600 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 B9D1Q9UPM9 204 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 RTTNQ86VV8 2226 aa16.06■□□□□ 0.16
PPP4R1-215ENST00000580182 IGLV1-36A0A0B4J1U3 117 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 C5orf49A4QMS7 147 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 C12orf71A8MTZ7 269 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 FAM171A2A8MVW0 826 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 RNF223E7ERA6 249 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 SNAP29O95721 258 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 RASSF2P50749 326 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 EFNA4P52798 201 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 PCBD1P61457 104 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 MEP1BQ16820 701 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 RPL13AP3Q6NVV1 102 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 HS3ST5Q8IZT8 346 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 PAPD5Q8NDF8 572 aaKnown RBP16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 OR52L1Q8NGH7 329 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 OR4Q3Q8NH05 313 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 GIPC3Q8TF64 312 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 FEVQ99581 238 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 TSSK6Q9BXA6 273 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 TBC1D23Q9NUY8 699 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 ARMC1Q9NVT9 282 aa16.05■□□□□ 0.16
PPP4R1-215ENST00000580182 IGHV4-30-2A0A087WSY4 118 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 IDH3BO43837 385 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 CLPTM1O96005 669 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 F12P00748 615 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 RENP00797 406 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 LCKP06239 509 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 GAAP10253 952 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 CRABP1P29762 137 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 WNT5AP41221 380 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 PPOXP50336 477 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 UCP2P55851 309 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 MAD2L1BPQ15013 274 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 ZNF362Q5T0B9 420 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 RGS7BPQ6MZT1 257 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 Q71RC1 249 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 SYT9Q86SS6 491 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 ZNF101Q8IZC7 436 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 CYB561A3Q8NBI2 242 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 NPEPL1Q8NDH3 523 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 ICA1LQ8NDH6 482 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 SNX18Q96RF0 628 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 LRMDAQ9H2I8 198 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 PDP1Q9P0J1 537 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 DUSP13Q9UII6 198 aa16.04■□□□□ 0.16
PPP4R1-215ENST00000580182 TIPRLO75663 272 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 ADRA2AP08913 450 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 GSTM3P21266 225 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 PRKACGP22612 351 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 ALDH3B1P43353 468 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 GDI2P50395 445 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 RPS23P62266 143 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 KCNMB1Q16558 191 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 DNM1P34Q6PK57 102 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 ALDH16A1Q8IZ83 802 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 ZNRF4Q8WWF5 429 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 DDOQ99489 341 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 REG4Q9BYZ8 158 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 DYNLRB1Q9NP97 96 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 ASH2LQ9UBL3 628 aa16.03■□□□□ 0.16
PPP4R1-215ENST00000580182 DOK2O60496 412 aa16.02■□□□□ 0.16
PPP4R1-215ENST00000580182 E2F6O75461 281 aa16.02■□□□□ 0.16
PPP4R1-215ENST00000580182 TFP02787 698 aa16.02■□□□□ 0.16
PPP4R1-215ENST00000580182 PCSK6P29122 969 aa16.02■□□□□ 0.16
PPP4R1-215ENST00000580182 RAD52P43351 418 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms