RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SYT9Q86SS6 491 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 GLCCI1Q86VQ1 547 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 SLC25A40Q8TBP6 338 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 SLC7A13Q8TCU3 470 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 Q96M85 177 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 OR2J1Q9GZK6 312 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 ABCD2Q9UBJ2 740 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 ADAM18Q9Y3Q7 739 aa13.54□□□□□ -0.24
CRLF3-203ENST00000578692 FAM32AQ9Y421 112 aaKnown RBP13.54□□□□□ -0.24
CRLF3-203ENST00000578692 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 H7C1C5 153 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 XKRYO14609 159 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 AHCYL1O43865 530 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 NGFP01138 241 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 SCG5P05408 212 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 GAAP10253 952 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 MPV17P39210 176 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 ZNF81P51508 661 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 LMO4P61968 165 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 LCN6P62502 163 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 SRSF2Q01130 221 aaKnown RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 ENDOGQ14249 297 aaKnown RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 LIPNQ5VXI9 398 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 FAM156AQ8NDB6 213 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 ABHD4Q8TB40 342 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 KLF14Q8TD94 323 aaPredicted RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 GTF3AQ92664 365 aaKnown RBP13.53□□□□□ -0.24
CRLF3-203ENST00000578692 C4orf45Q96LM5 186 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 WACQ9BTA9 647 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 ELOVL3Q9HB03 270 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 POLE4Q9NR33 117 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 EGFL7Q9UHF1 273 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 TMEM5Q9Y2B1 443 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 MXRA5Q9NR99 2828 aa13.53□□□□□ -0.24
CRLF3-203ENST00000578692 PLSCR5A0PG75 271 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 PTP4A3O75365 173 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 H1F0P07305 194 aaKnown RBP13.52□□□□□ -0.25
CRLF3-203ENST00000578692 ZNF26P17031 533 aaPredicted RBP13.52□□□□□ -0.25
CRLF3-203ENST00000578692 RHCEP18577 417 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 MMP15P51511 669 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 PPP1CBP62140 327 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 MVKQ03426 396 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 ARL9Q6T311 187 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 USP51Q70EK9 711 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 FAM122BQ7Z309 247 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 IPCEF1Q8WWN9 437 aaPredicted RBP13.52□□□□□ -0.25
CRLF3-203ENST00000578692 TMEM186Q96B77 213 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 FAM46AQ96IP4 442 aaKnown RBP13.52□□□□□ -0.25
CRLF3-203ENST00000578692 ZNF570Q96NI8 536 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 NDEL1Q9GZM8 345 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 SAP30LQ9HAJ7 183 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 LPAR2Q9HBW0 351 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
CRLF3-203ENST00000578692 HIF1ANQ9NWT6 349 aa13.52□□□□□ -0.25
CRLF3-203ENST00000578692 A0A1W2PRQ8 180 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 PRSS37A4D1T9 235 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 SPRY3O43610 288 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 ICMTO60725 284 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 GMNNO75496 209 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 NDUFB2O95178 105 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 IGHV1-46P01743 117 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 MSMBP08118 114 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 ANPEPP15144 967 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 PRDX6P30041 224 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 LIPAP38571 399 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 ARHGDIAP52565 204 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 DGCR6Q14129 220 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 HFEQ30201 348 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 MESTQ5EB52 335 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 TMEM255AQ5JRV8 349 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 RFPL4BQ6ZWI9 263 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 RFLNBQ8N5W9 214 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 C7orf34Q96L11 122 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 C19orf24Q9BVV8 132 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 EMC7Q9NPA0 242 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 SPAG4Q9NPE6 437 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 NDUFAF4Q9P032 175 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
CRLF3-203ENST00000578692 SAMD4AQ9UPU9 718 aaKnown RBP13.51□□□□□ -0.25
CRLF3-203ENST00000578692 SIGLEC7Q9Y286 467 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 GRIP1Q9Y3R0 1128 aa13.51□□□□□ -0.25
CRLF3-203ENST00000578692 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 H3BSA7 217 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 ATP8B1O43520 1251 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 COX5BP10606 129 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 OMPP47874 163 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 SCRN3Q0VDG4 424 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 FGD3Q5JSP0 725 aa13.5□□□□□ -0.25
CRLF3-203ENST00000578692 OR51F2Q8NH61 342 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms