RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PPIBP23284 216 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ABCD3P28288 659 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 SOX6P35712 828 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 PTGDSP41222 190 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 SOX3P41225 446 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 MAGEA5P43359 124 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ASCL1P50553 236 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 BMXP51813 675 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 TMBIM6P55061 237 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 CSNK2BP67870 215 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 EEF1A1P68104 462 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 EGR4Q05215 589 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 CRYZQ08257 329 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 HSPB3Q12988 150 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 EXOSC7Q15024 291 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 HSPB2Q16082 182 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 DUSP5Q16690 384 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 DEFB113Q30KQ7 82 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ARHGAP11BQ3KRB8 267 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 FBXL19-AS1Q494R0 122 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 EEF1A1P5Q5VTE0 462 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 C16orf47Q6ZP98 133 aaPredicted RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 RTL4Q6ZR62 310 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ZER1Q7Z7L7 766 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ANKRD46Q86W74 232 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 PTOV1Q86YD1 416 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 TMEM217Q8N7C4 229 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 WFDC11Q8NEX6 87 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 OR52E4Q8NGH9 312 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 OR4A15Q8NGL6 344 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 SLC26A7Q8TE54 656 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 RNASE6Q93091 150 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 C12orf43Q96C57 262 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 C16orf58Q96GQ5 468 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ZNF583Q96ND8 569 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 TRNT1Q96Q11 434 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 NPAS1Q99742 590 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 SLC35A5Q9BS91 424 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 OSBPL11Q9BXB4 747 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 HDHD5Q9BXW7 423 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ITPAQ9BY32 194 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 YTHDF1Q9BYJ9 559 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 OR8D2Q9GZM6 311 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ZNF350Q9GZX5 532 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 NXF5Q9H1B4 397 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 NANOGQ9H9S0 305 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 EFCAB1Q9HAE3 211 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 A4GALTQ9NPC4 353 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 ZCCHC3Q9NUD5 404 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 THUMPD1Q9NXG2 353 aaKnown RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 COPS7AQ9UBW8 275 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 PCDHGB4Q9UN71 923 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 CHCHD2Q9Y6H1 151 aaPredicted RBP4.26□□□□□ -1.73
KARSP3-201ENST00000571212 KCNE3Q9Y6H6 103 aa4.26□□□□□ -1.73
KARSP3-201ENST00000571212 KIAA1549Q9HCM3 1950 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 HIVEP2P31629 2446 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 MED12LQ86YW9 2145 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 RNF103-CHMP3A0A140T963 221 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 A0A1W2PQD3 144 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 A6NLC8 198 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 B4DXG7 233 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 F5H0A9 414 aaPredicted RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 G3V3Y1 287 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 WWP2O00308 870 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 NR5A2O00482 541 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 MRASO14807 208 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ANGPT2O15123 496 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 FADS1O60427 444 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 NOL3O60936 208 aaKnown RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 NOS1APO75052 506 aaPredicted RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 SERPINI2O75830 405 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 SNAP29O95721 258 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 P04436 131 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 HEXAP06865 529 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 CSF1P09603 554 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ARSBP15848 533 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 TNNI3P19429 210 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 EFNA1P20827 205 aaPredicted RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 CEACAM8P31997 349 aaPredicted RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 DNASE1L1P49184 302 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 POU3F4P49335 361 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 STARP49675 285 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 CRYBA2P53672 197 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 SELENOVP59797 346 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 MRPS22P82650 360 aaKnown RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 RBBP4Q09028 425 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 RIPPLY1Q0D2K3 151 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ITGADQ13349 1161 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 SNTB1Q13884 538 aaKnown RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 VEZF1Q14119 521 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 LASP1Q14847 261 aaKnown RBP4.25□□□□□ -1.73
KARSP3-201ENST00000571212 CDK10Q15131 360 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ZNF141Q15928 474 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 SGCAQ16586 387 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 LRRC36Q1X8D7 754 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 KLHL26Q53HC5 615 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ESCO2Q56NI9 601 aa4.25□□□□□ -1.73
KARSP3-201ENST00000571212 ALG10Q5BKT4 473 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms