RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 OR10AC1Q8NH08 325 aa9.57□□□□□ -0.88
USB1-212ENST00000566082 SLAMF9Q96A28 289 aa9.57□□□□□ -0.88
USB1-212ENST00000566082 PBDC1Q9BVG4 233 aa9.57□□□□□ -0.88
USB1-212ENST00000566082 LDAHQ9H6V9 325 aa9.57□□□□□ -0.88
USB1-212ENST00000566082 PCDHGA9Q9Y5G4 932 aaKnown RBP9.57□□□□□ -0.88
USB1-212ENST00000566082 PUS1Q9Y606 427 aaKnown RBP eCLIP9.57□□□□□ -0.88
USB1-212ENST00000566082 LOC107986453A0A1B0GWG9 222 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 F5H5K5 113 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 RBMXL2O75526 392 aaKnown RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 MESP2Q0VG99 397 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 DCXRQ7Z4W1 244 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CBLN2Q8IUK8 224 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TEX19Q8NA77 164 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 MARCH1Q8TCQ1 289 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 APOBEC4Q8WW27 367 aaKnown RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 CHST6Q9GZX3 395 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 BANF2Q9H503 90 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 MRPS2Q9Y399 296 aaKnown RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 VSTM2BA6NLU5 285 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 IMPA2O14732 288 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CTDSPLO15194 276 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 LILRB5O75023 590 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CTAG2O75638 210 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 B3GALNT1O75752 331 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 GLI4P10075 376 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TUBG1P23258 451 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CSF2RBP32927 897 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 PLA2G7Q13093 441 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 DCAF12L2Q5VW00 463 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 PGAP1Q75T13 922 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 C16orf52Q8NHV5 167 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ST7LQ8TDW4 575 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 HOXB13Q92826 284 aaPredicted RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 CMTM3Q96MX0 182 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 JAM3Q9BX67 310 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ST6GALNAC2Q9UJ37 374 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 OR52A1Q9UKL2 312 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TET1Q8NFU7 2136 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 MKI67P46013 3256 aaKnown RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 A0A087WV62 115 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 SLC17A2O00624 439 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 GALR3O60755 368 aaPredicted RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 TIMP1P01033 207 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CT62P0C5K7 136 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 NAGAP17050 411 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 SERPINA2P20848 420 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 HRH1P35367 487 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ACKR1Q16570 336 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 IAH1Q2TAA2 248 aaPredicted RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 SULF2Q8IWU5 870 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 FRMD1Q8N878 549 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 BCORP1Q8N888 145 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 OR1M1Q8NGA1 313 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 PGLYRP3Q96LB9 341 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 LRFN5Q96NI6 719 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 PRSS27Q9BQR3 290 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TMEM59Q9BXS4 323 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TEX101Q9BY14 249 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 NDRG3Q9UGV2 375 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 GMEB2Q9UKD1 530 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ZMIZ1Q9ULJ6 1067 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 FAM186AA6NE01 2351 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 PSME4Q14997 1843 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 TRAV8-7A0A075B6U6 113 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 CXorf51AA0A1B0GTR3 108 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 EPPINO95925 133 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 GABRR1P24046 479 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 SFTPDP35247 375 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ZNF93P35789 620 aaPredicted RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 SNU13P55769 128 aaKnown RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 ZNF674Q2M3X9 581 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 WDR38Q5JTN6 314 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 MDGA2Q7Z553 956 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 OR4D10Q8NGI6 311 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 BADQ92934 168 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ZNF681Q96N22 645 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 SFXN1Q9H9B4 322 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
USB1-212ENST00000566082 IL23AQ9NPF7 189 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 ZFP57Q9NU63 452 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 HAO2Q9NYQ3 351 aa9.56□□□□□ -0.88
USB1-212ENST00000566082 DICER1Q9UPY3 1922 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 A0A087WUJ7 227 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 CCDC163A0A0D9SF12 145 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 C2orf72A6NCS6 295 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 OR6C65A6NJZ3 312 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 SDCBPO00560 298 aaPredicted RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 OR2B8PP59922 312 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 HTRA4P83105 476 aaPredicted RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 ZIC1Q15915 447 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ANKRD16Q6P6B7 361 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 LILRA6Q6PI73 481 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 MEX3BQ6ZN04 569 aaKnown RBP9.55□□□□□ -0.88
USB1-212ENST00000566082 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
USB1-212ENST00000566082 ZNF595Q8IYB9 648 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms