RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 AKIP1Q9NQ31 210 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF223Q9UK11 482 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 OR52A1Q9UKL2 312 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 THSD7AQ9UPZ6 1657 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 HCRTO43612 131 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ADH4P08319 380 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ABCD3P28288 659 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 THBS4P35443 961 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 HCCSP53701 268 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ACSM1Q08AH1 577 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 IGFBP7Q16270 282 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 TAF9Q16594 264 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 LRRC37A5PQ49AS3 106 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 MARCH8Q5T0T0 291 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 PAPD4Q6PIY7 484 aaKnown RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 RPS19BP1Q86WX3 136 aaKnown RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 PTOV1Q86YD1 416 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SCAMP4Q969E2 229 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ST6GALNAC5Q9BVH7 336 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 CMC2Q9NRP2 79 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 USP22Q9UPT9 525 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 MED16Q9Y2X0 877 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SPINT2O43291 252 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 MT-ND4LP03901 98 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ADRB1P08588 477 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 IFI6P09912 130 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 FOLR1P15328 257 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 PRKACAP17612 351 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 BMI1P35226 326 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 RPS19P39019 145 aaKnown RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 KCNJ3P48549 501 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 CAV2P51636 162 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 NR0B1P51843 470 aaKnown RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SLC25A1P53007 311 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 PFN3P60673 137 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 CHRNEQ04844 493 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 TPBGQ13641 420 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 PMS2CLQ68D20 193 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 DPPA3Q6W0C5 159 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF551Q7Z340 670 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 ADGRF3Q8IZF5 1079 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SPICQ8N5J4 248 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SLC38A5Q8WUX1 472 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 SSX3Q99909 188 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 NRSN2Q9GZP1 204 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 C6orf106Q9H6K1 298 aaPredicted RBP7.16□□□□□ -1.26
VPS13D-211ENST00000543710 NSG2Q9Y328 171 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 B3GALT1Q9Y5Z6 326 aa7.16□□□□□ -1.26
VPS13D-211ENST00000543710 CEBPZOSA8MTT3 80 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF587BE7ETH6 402 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF749O43361 778 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 CD14P08571 375 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 SPI1P17947 270 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 DEFA6Q01524 100 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 KRTCAP3Q53RY4 240 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 BTNL3Q6UXE8 466 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 Q6ZTK2 550 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 ADIPOR2Q86V24 386 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 OR2AE1Q8NHA4 323 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 C10orf35Q96D05 121 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 EGLN2Q96KS0 407 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 PDFQ9HBH1 243 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 WSB2Q9NYS7 404 aaPredicted RBP7.15□□□□□ -1.26
VPS13D-211ENST00000543710 SLC5A10A0PJK1 596 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 PRAMEF25A6NGN4 478 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 UMAD1C9J7I0 102 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 OIP5O43482 229 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 BCL2L11O43521 198 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 SDHAP31040 664 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 ETV5P41161 510 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 STARD6P59095 220 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 BPIFB3P59826 476 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 PPIAP62937 165 aaKnown RBP7.15□□□□□ -1.26
VPS13D-211ENST00000543710 HBA1P69905 142 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 ZNF778Q96MU6 729 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 RNF2Q99496 336 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 NIPSNAP3BQ9BS92 247 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 SSUH2Q9Y2M2 353 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 POLDIP2Q9Y2S7 368 aa7.15□□□□□ -1.26
VPS13D-211ENST00000543710 A0A1B0GX78 115 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 XKRY2A2RUG3 117 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 ZBTB42B2RXF5 422 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 HCRTR1O43613 425 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 GSTZ1O43708 216 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 RAB4AP20338 218 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 AQP2P41181 271 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 PIN1Q13526 163 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 FZD2Q14332 565 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 ACOT6Q3I5F7 207 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 COX19Q49B96 90 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 FAHD2BQ6P2I3 314 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 H1FNTQ75WM6 255 aaPredicted RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 GPX8Q8TED1 209 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 EMG1Q92979 244 aaKnown RBP7.15□□□□□ -1.27
VPS13D-211ENST00000543710 TMIGD2Q96BF3 282 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 FAM3DQ96BQ1 224 aa7.15□□□□□ -1.27
VPS13D-211ENST00000543710 FAHD2AQ96GK7 314 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms