RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CLDN22Q8N7P3 220 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FAM216AQ8WUB2 273 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 JMJD8Q96S16 334 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 WNT5BQ9H1J7 359 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 GID8Q9NWU2 228 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 CGGBP1Q9UFW8 167 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 A4GNTQ9UNA3 340 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PKD1L1Q8TDX9 2849 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 A0A1W2PPL8 197 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZSCAN5BA6NJL1 495 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 H3BSA7 217 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ICMTO60725 284 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 UBOX5O94941 541 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ADH4P08319 380 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 GATA3P23771 443 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ARHGDIAP52565 204 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 CGB2Q6NT52 195 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FOXL2NBQ6ZUU3 175 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RFPL4BQ6ZWI9 263 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PEG10Q86TG7 708 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 IGFN1Q86VF2 1251 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 OR2T12Q8NG77 320 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 NANPQ8TBE9 248 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 LZICQ8WZA0 190 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 GCDHQ92947 438 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 DIRC2Q96SL1 478 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ELOVL3Q9HB03 270 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZDHHC8Q9ULC8 765 aa16.69■□□□□ 0.26
TNFRSF1B-204ENST00000536782 LOC100653049A0A140TA62 436 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ISPDA4D126 451 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 A6NIZ1 184 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 KRT34O76011 436 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 NGFP01138 241 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 COMPP49747 757 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RAP1BP61224 184 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RAP1AP62834 184 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ANKDD1AQ495B1 522 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZMAT1Q5H9K5 638 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZNF774Q6NX45 483 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ARL9Q6T311 187 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 NRMQ8IXM6 262 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MICU2Q8IYU8 434 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 LRRC75AQ8NAA5 344 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 OR51A7Q8NH64 312 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 C4orf45Q96LM5 186 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RBM4Q9BWF3 364 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SUCNR1Q9BXA5 334 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SAR1AQ9NR31 198 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 KLHL21Q9UJP4 597 aa16.68■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TRAV27A0A087WT01 109 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ELOVL7A1L3X0 281 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 C12orf71A8MTZ7 269 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ADRA2CP18825 462 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MSR1P21757 451 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ZER1Q7Z7L7 766 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SYT9Q86SS6 491 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 OAFQ86UD1 273 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TREML1Q86YW5 311 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FNDC11Q9BVV2 318 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PLA2G12AQ9BZM1 189 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 C7orf69Q9H7B7 122 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MSL2Q9HCI7 577 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 UBAP1Q9NZ09 502 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RHCGQ9UBD6 479 aa16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 NDRG4Q9ULP0 352 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TMEM89A2RUT3 159 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 EFCAB9A8MZ26 197 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 CD55P08174 381 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 YAP1P46937 504 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 LIMS1P48059 325 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PRKCDQ05655 676 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ENDOGQ14249 297 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TRAM2Q15035 370 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MTX3Q5HYI7 312 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 OFCC1Q8IZS5 231 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 BPIFB2Q8N4F0 458 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 C3orf56Q8N813 242 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 ST7LQ8TDW4 575 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 GEMIN6Q8WXD5 167 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SLC6A7Q99884 636 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 WACQ9BTA9 647 aa16.66■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TIMM8AO60220 97 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 IFNW1P05000 195 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 GSTM3P21266 225 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FUT4P22083 530 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SLC9A3P48764 834 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 LCN2P80188 198 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TNFAIP6P98066 277 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SF3A3Q12874 501 aaKnown RBP eCLIP16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FHL1Q13642 323 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 RNF113BQ8IZP6 322 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 POLE4Q9NR33 117 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MAN2C1Q9NTJ4 1040 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SNX13Q9Y5W8 968 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 NPTNQ9Y639 398 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MEGF8Q7Z7M0 2845 aa16.65■□□□□ 0.26
TNFRSF1B-204ENST00000536782 H7C1C5 153 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms