RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ZNF283Q8N7M2 679 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ZIC4Q8N9L1 334 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 SLC30A7Q8NEW0 376 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 OR1J1Q8NGS3 322 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 OR6Y1Q8NGX8 325 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CLHC1Q8NHS4 586 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ZNF563Q8TA94 476 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TMEM234Q8WY98 164 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 RNFT2Q96EX2 444 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 PDLIM5Q96HC4 596 aaKnown RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 C18orf15Q96N68 181 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TMEM246Q9BRR3 403 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 THUMPD3Q9BV44 507 aaKnown RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 PTDSS2Q9BVG9 487 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CDCA4Q9BXL8 241 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MRPL1Q9BYD6 325 aaKnown RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 BCL2L14Q9BZR8 327 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 TRIM5Q9C035 493 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 LRMDAQ9H2I8 198 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 MMADHCQ9H3L0 296 aaPredicted RBP3.11□□□□□ -1.91
YBX3-205ENST00000536107 GIN1Q9NXP7 522 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 GRHL1Q9NZI5 618 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 PAK5Q9P286 719 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ERVK-18Q9QC07 812 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 CHRNA9Q9UGM1 479 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 FBXL3Q9UKT7 428 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 ZDHHC8Q9ULC8 765 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 POFUT2Q9Y2G5 429 aa3.11□□□□□ -1.91
YBX3-205ENST00000536107 A0A1B0GVI7 797 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 NUPR2A6NF83 97 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TTC36A6NLP5 189 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 LRRC30A6NM36 301 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TMEM178BH3BS89 294 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 M0R3G1 203 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ANKRD28O15084 1053 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SURF4O15260 269 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ZNF264O43296 627 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TIMM8AO60220 97 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SCN2BO60939 215 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SEMA3DO95025 777 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 KCNK2O95069 426 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 AKR7A3O95154 331 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 UBL3O95164 117 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 CYB5R3P00387 301 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 HCKP08631 526 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 CCDC175P0C221 793 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ZSCAN5DPP0CG00 497 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ACP2P11117 423 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 UBL4AP11441 157 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ETS2P15036 469 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 CCNOP22674 350 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ARRB2P32121 409 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SAA4P35542 130 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 HTR5AP47898 357 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 CDH13P55290 713 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 UCP2P55851 309 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 RWDD2BP57060 319 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TBX2Q13207 712 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 CNN3Q15417 329 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SEC23BQ15437 767 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SLC18A3Q16572 532 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TBC1D28Q2M2D7 210 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 MRGPRG-AS1Q2M3A8 158 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ZNF718Q3SXZ3 478 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SLC25A53Q5H9E4 307 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 THEM4Q5T1C6 240 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 CCNJQ5T5M9 372 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ASPHD1Q5U4P2 390 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 FAM45BPQ6NSW5 357 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 LYPD2Q6UXB3 125 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 COMMD6Q7Z4G1 85 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 RNF130Q86XS8 419 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TEX9Q8N6V9 391 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TMEM99Q8N816 258 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 COX18Q8N8Q8 333 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 NPEPL1Q8NDH3 523 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 OR2Z1Q8NG97 314 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 OR5M8Q8NGP6 311 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 OR1J2Q8NGS2 313 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 FAM45AQ8TCE6 357 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 TRPC4APQ8TEL6 797 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 WIPF2Q8TF74 440 aaPredicted RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 UBTD2Q8WUN7 234 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ST8SIA1Q92185 356 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ZNF524Q96C55 264 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 SAMD8Q96LT4 415 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 DUX3Q96PT4 197 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 ZNF382Q96SR6 550 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 PRPF18Q99633 342 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SF3B5Q9BWJ5 86 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 EBPLQ9BY08 206 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 HOXD1Q9GZZ0 328 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 NAT10Q9H0A0 1025 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SIRPDQ9H106 197 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 MRPL46Q9H2W6 279 aaKnown RBP3.1□□□□□ -1.91
YBX3-205ENST00000536107 SLC35C2Q9NQQ7 365 aa3.1□□□□□ -1.91
YBX3-205ENST00000536107 B3GNT2Q9NY97 397 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms