RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	CSF3	P09919	207 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	NOS3	P29474	1203 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	RAD52	P43351	418 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	PDLIM4	P50479	330 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	UCP2	P55851	309 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	TRAP1	Q12931	704 aa	Known RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	ALKBH6	Q3KRA9	238 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	DNAL1	Q4LDG9	190 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	CLEC12A	Q5QGZ9	265 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	OR2T5	Q6IEZ7	315 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	ZNF774	Q6NX45	483 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	LEG1	Q6P5S2	330 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	JAZF1	Q86VZ6	243 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	GLB1L2	Q8IW92	636 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	OR4C15	Q8NGM1	316 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	OR2T29	Q8NH02	315 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	OR4K13	Q8NH42	304 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	C10orf105	Q8TEF2	133 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	POM121L2	Q96KW2	1035 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	TSSK2	Q96PF2	358 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	NMNAT3	Q96T66	252 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	BTBD10	Q9BSF8	475 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	TRIM15	Q9C019	465 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	EGLN3	Q9H6Z9	239 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	REEP1	Q9H902	201 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SRA1	Q9HD15	236 aa	Known RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	VNN3	Q9NY84	501 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	VSX1	Q9NZR4	365 aa	Predicted RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	EIF3K	Q9UBQ5	218 aa	Known RBP	12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	REV1	Q9UBZ9	1251 aa		12.16	□□□□□ -0.46
CCHCR1-222	ENST00000507459	CR1	P17927	2039 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	LOC100509620	A0A075B734	347 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	GPANK1	O95872	356 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	CLPTM1	O96005	669 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	REN	P00797	406 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	IGFBP1	P08833	259 aa	Predicted RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	RAP2A	P10114	183 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	APEH	P13798	732 aa	Known RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SLC25A16	P16260	332 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	HIST1H1C	P16403	213 aa	Known RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	PCSK6	P29122	969 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	EVX1	P49640	407 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SELENOV	P59797	346 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	DBP	Q10586	325 aa	Predicted RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SLC35F1	Q5T1Q4	408 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	ZNF620	Q6ZNG0	422 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	LINC00471	Q8N535	108 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	AQP11	Q8NBQ7	271 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	OR1J1	Q8NGS3	322 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SYNPR	Q8TBG9	265 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	NEU4	Q8WWR8	484 aa	Predicted RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	C11orf40	Q8WZ69	217 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	POP5	Q969H6	163 aa	Known RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	CHID1	Q9BWS9	393 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	BCL2L14	Q9BZR8	327 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	TAAR3P	Q9P1P4	343 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	TLN2	Q9Y4G6	2542 aa		12.15	□□□□□ -0.46
CCHCR1-222	ENST00000507459	DCTN6	O00399	190 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ARPC3	O15145	178 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	DNAJC8	O75937	253 aa	Predicted RBP	12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	TP53	P04637	393 aa	Predicted RBP	12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NAT2	P11245	290 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	DAO	P14920	347 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CRABP1	P29762	137 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	WNT5A	P41221	380 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ERF	P50548	548 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	KLF3	P57682	345 aa	Predicted RBP	12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SCRN3	Q0VDG4	424 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	FLOT2	Q14254	428 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	NKPD1	Q17RQ9	610 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SPATA46	Q5T0L3	261 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	DNM1P34	Q6PK57	102 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SYT9	Q86SS6	491 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SPATA24	Q86W54	205 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZNF101	Q8IZC7	436 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ADGRG5	Q8IZF4	528 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SDR9C7	Q8NEX9	313 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR52L1	Q8NGH7	329 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	OR52E2	Q8NGJ4	325 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CANT1	Q8WVQ1	401 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	PIMREG	Q9BSJ6	248 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	MS4A5	Q9H3V2	200 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	FN3K	Q9H479	309 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	RPRD1B	Q9NQG5	326 aa	Known RBP	12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	B9D1	Q9UPM9	204 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	POLR1D	Q9Y2S0	133 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CDH10	Q9Y6N8	788 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ZAN	Q9Y493	2812 aa		12.14	□□□□□ -0.47
CCHCR1-222	ENST00000507459	ABCA1	O95477	2261 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	LOC390937	A0A1W2PQ73	354 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	DHRS12	A0PJE2	317 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	AQP12B	A6NM10	295 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	LYNX1	G3V0Z9	82 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	GNGT2	O14610	69 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	SGCE	O43556	437 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	DOK2	O60496	412 aa		12.13	□□□□□ -0.47
CCHCR1-222	ENST00000507459	CST1	P01037	141 aa		12.13	□□□□□ -0.47

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