RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FOXC2Q99958 501 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 RAB1BQ9H0U4 201 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 DEFB127Q9H1M4 99 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 RPF2Q9H7B2 306 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 CSNK1G1Q9HCP0 422 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 TREM1Q9NP99 234 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 KCNJ16Q9NPI9 418 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF302Q9NR11 478 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 NESP48681 1621 aa2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 CENPJQ9HC77 1338 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-208ENST00000505553 CFAP65Q6ZU64 1925 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 A0A1B0GVI7 797 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 NUPL2O15504 423 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 RRP8O43159 456 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 MPDU1O75352 247 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 YEATS4O95619 227 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 C6orf47O95873 294 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 THY1P04216 161 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 KLK1P06870 262 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 TACSTD2P09758 323 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 CCL2P13500 99 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 GABRR1P24046 479 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 F2RP25116 425 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ANP32AP39687 249 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 APOC4P55056 127 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 TIMM10P62072 90 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 KIAA0087Q14695 138 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 GPNMBQ14956 572 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ANGPT1Q15389 498 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 SYCP1Q15431 976 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 SLC1A5Q15758 541 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 GABRA6Q16445 453 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 KCTD19Q17RG1 926 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 KIF26BQ2KJY2 2108 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 C5orf64Q2M2E5 130 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 UTF1Q5T230 341 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ERICH5Q6P6B1 374 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 PID1Q7Z2X4 250 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 THOC6Q86W42 341 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 PNKDQ8N490 385 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 FAM86B1Q8N7N1 296 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 OR4F15Q8NGB8 312 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 OR10G9Q8NGN4 311 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ACER1Q8TDN7 264 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 GEMIN6Q8WXD5 167 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 NDRG1Q92597 394 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 GPR21Q99679 349 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 NRIP2Q9BQI9 281 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 DEFB126Q9BYW3 111 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 CHMP4BQ9H444 224 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ARMC7Q9H6L4 198 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF275Q9NSD4 429 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 ADA2Q9NZK5 511 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 TNRQ92752 1358 aa2.87□□□□□ -1.95
TRAPPC13-208ENST00000505553 RIMBP3CA6NJZ7 1639 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RIMBP3BA6NNM3 1639 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RIMBP3Q9UFD9 1639 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 A0A0J9YXY3 114 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 A6NDN8 102 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 H3BN98 237 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RFXANKO14593 260 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 XKRYO14609 159 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 SRP72O76094 671 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 TIMP1P01033 207 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 HSPB1P04792 205 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 GFAPP14136 432 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 IVDP26440 423 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 BTCP35070 178 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 DEKP35659 375 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RIPPLY3P57055 190 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 ATP6V0D1P61421 351 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RPS21P63220 83 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 MXD1Q05195 221 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 TCP10Q12799 353 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 FZD2Q14332 565 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 FCN2Q15485 313 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZNF726P1Q15940 193 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 C18orf21Q32NC0 220 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 ZBED5Q49AG3 693 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 PTPN20Q4JDL3 420 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 LRRC10Q5BKY1 277 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 ANKRD22Q5VYY1 191 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 LCN12Q6JVE5 192 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RWDD4Q6NW29 188 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 TMPRSS11AQ6ZMR5 421 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 LINC00336Q6ZUF6 198 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 OAFQ86UD1 273 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 UNC93AQ86WB7 457 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 KIF2BQ8N4N8 673 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 C14orf178Q8N769 122 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 MNS1Q8NEH6 495 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 OR6K6Q8NGW6 343 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 OR51F2Q8NH61 342 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 MARC2Q969Z3 335 aa2.86□□□□□ -1.95
TRAPPC13-208ENST00000505553 RNF170Q96K19 258 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms