RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PAX7P23759 505 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 F2RP25116 425 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 PSMB5P28074 263 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 MAS1LP35410 378 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 GZMMP51124 257 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 CRADDP78560 199 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 HTD2P86397 168 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 IHHQ14623 411 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 SNRNP35Q16560 246 aaKnown RBP0.64□□□□□ -2.31
CCDC93-209ENST00000488908 ZSCAN26Q16670 478 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 PGGHGQ32M88 737 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 KRTAP21-3Q3LHN1 58 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 AVPI1Q5T686 147 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 FAM222AQ5U5X8 452 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 METTL21CQ5VZV1 264 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 CCDC73Q6ZRK6 1079 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 TMEM256Q8N2U0 113 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 ARL10Q8N8L6 244 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 HSD17B11Q8NBQ5 300 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 OR10R2Q8NGX6 335 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 EMG1Q92979 244 aaKnown RBP0.64□□□□□ -2.31
CCDC93-209ENST00000488908 PTX4Q96A99 478 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 MRGPRFQ96AM1 343 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 GALNT14Q96FL9 552 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 ZNF488Q96MN9 340 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 IP6K3Q96PC2 410 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 NPY6RQ99463 290 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 LZTS2Q9BRK4 669 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 SHANK2-AS3Q9BTD1 123 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 RSG1Q9BU20 258 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 OR52D1Q9H346 318 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 FN3KRPQ9HA64 309 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 NMRAL1Q9HBL8 299 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 TRMT112Q9UI30 125 aaKnown RBP0.64□□□□□ -2.31
CCDC93-209ENST00000488908 MRPS7Q9Y2R9 242 aaKnown RBP0.64□□□□□ -2.31
CCDC93-209ENST00000488908 ATP6V0A2Q9Y487 856 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 GPRASP1Q5JY77 1395 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 COL11A1P12107 1806 aaPredicted RBP0.64□□□□□ -2.31
CCDC93-209ENST00000488908 MAPK8IP3Q9UPT6 1336 aa0.64□□□□□ -2.31
CCDC93-209ENST00000488908 SPECC1L-ADORA2AF8WAN1 911 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 MANBAO00462 879 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 PLXNB1O43157 2135 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CHMP2AO43633 222 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 ASGR1P07306 291 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 OR8U9P0C7N5 309 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 KRT13P13646 458 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 TGFBR2P37173 567 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CDKN1BP46527 198 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CCT3P49368 545 aaKnown RBP0.63□□□□□ -2.31
CCDC93-209ENST00000488908 ATP1B3P54709 279 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 RBX1P62877 108 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CCNA1P78396 465 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 TWF1Q12792 350 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CDH17Q12864 832 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 RBMY1FQ15415 496 aaKnown RBP0.63□□□□□ -2.31
CCDC93-209ENST00000488908 EXOC3L2Q2M3D2 409 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 NADK2Q4G0N4 442 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 PTPN20Q4JDL3 420 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 MPV17L2Q567V2 206 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 ZFAND6Q6FIF0 208 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 DNAJC24Q6P3W2 148 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 PLET1Q6UQ28 207 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 TMEM205Q6UW68 189 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 FBXW12Q6X9E4 464 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 C16orf47Q6ZP98 133 aaPredicted RBP0.63□□□□□ -2.31
CCDC93-209ENST00000488908 METTL13Q8N6R0 699 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 TTLQ8NG68 377 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 OR6N1Q8NGY5 312 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 OR10J6PQ8NGY7 276 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 RHEBL1Q8TAI7 183 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 UBE2Q2Q8WVN8 375 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 PIBF1Q8WXW3 757 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 C10orf35Q96D05 121 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 COQ2Q96H96 371 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 CNN2Q99439 309 aaKnown RBP0.63□□□□□ -2.31
CCDC93-209ENST00000488908 HSD17B10Q99714 261 aaKnown RBP0.63□□□□□ -2.31
CCDC93-209ENST00000488908 POLE4Q9NR33 117 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 SIGLEC7Q9Y286 467 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 PIGLQ9Y2B2 252 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 ZSWIM8A7E2V4 1837 aa0.63□□□□□ -2.31
CCDC93-209ENST00000488908 TRAV19A0A0A6YYK7 116 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 IGHV7-4-1A0A0J9YVY3 117 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 PCP4L1A6NKN8 68 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 F6UB75 175 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 K7EQM0 130 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ANGPT2O15123 496 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 REM1O75628 298 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SURF6O75683 361 aaKnown RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 SLC22A5O76082 557 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 NDUFB10O96000 172 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 CYB5R3P00387 301 aaPredicted RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 RAB3AP20336 220 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 MPV17P39210 176 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 IDH2P48735 452 aaKnown RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 VSX2P58304 361 aaPredicted RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 TAS2R31P59538 309 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ADARB1P78563 741 aaKnown RBP0.62□□□□□ -2.31
CCDC93-209ENST00000488908 TNFRSF9Q07011 255 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 FGL1Q08830 312 aa0.62□□□□□ -2.31
CCDC93-209ENST00000488908 ECH1Q13011 328 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms