RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 TBC1D28Q2M2D7 210 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 LEG1Q6P5S2 330 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 UNQ6126/PRO20091Q6UXV3 157 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 ZBTB46Q86UZ6 589 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 C1orf174Q8IYL3 243 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 ALDH16A1Q8IZ83 802 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 FEVQ99581 238 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 BDH2Q9BUT1 245 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 PLA2G12AQ9BZM1 189 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 DCLRE1BQ9H816 532 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.77
VPS52-213ENST00000461743 PDP1Q9P0J1 537 aaPredicted RBP10.27□□□□□ -0.77
VPS52-213ENST00000461743 NKX1-2Q9UD57 310 aaPredicted RBP10.27□□□□□ -0.77
VPS52-213ENST00000461743 SCOCQ9UIL1 159 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 KLHL21Q9UJP4 597 aa10.27□□□□□ -0.77
VPS52-213ENST00000461743 IGLV1-36A0A0B4J1U3 117 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 B9A039 149 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 SLC16A7O60669 478 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 ICMTO60725 284 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 CD8AP01732 235 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 TP53P04637 393 aaPredicted RBP10.26□□□□□ -0.77
VPS52-213ENST00000461743 GAAP10253 952 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 NR4A1P22736 598 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 APLNRP35414 380 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 EVX1P49640 407 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 ACTR3P61158 418 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
VPS52-213ENST00000461743 CCNIQ14094 377 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 ENDOGQ14249 297 aaKnown RBP10.26□□□□□ -0.77
VPS52-213ENST00000461743 RAB39AQ14964 217 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 PABPC1L2AQ5JQF8 200 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 CLEC12AQ5QGZ9 265 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 TMEM154Q6P9G4 183 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 HIPK1Q86Z02 1210 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 PARP8Q8N3A8 854 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 OR8D4Q8NGM9 314 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 OR4K13Q8NH42 304 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 OR5K1Q8NHB7 308 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 FGFBP3Q8TAT2 258 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 NMNAT3Q96T66 252 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 NIPSNAP1Q9BPW8 284 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 ZNF416Q9BWM5 594 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 TSSK6Q9BXA6 273 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 OR2H1Q9GZK4 316 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 NUAK2Q9H093 628 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 GABARAPL1Q9H0R8 117 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 CDH20Q9HBT6 801 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 KIF17Q9P2E2 1029 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 ENOPH1Q9UHY7 261 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 KCNG2Q9UJ96 466 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
VPS52-213ENST00000461743 AP4S1Q9Y587 144 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 TIMM10BQ9Y5J6 103 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 TANC2Q9HCD6 1990 aa10.26□□□□□ -0.77
VPS52-213ENST00000461743 H3BN98 237 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 H3BSA7 217 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 TIPRLO75663 272 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SOX14O95416 240 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 OSMP13725 252 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 ZNF3P17036 446 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 GRK5P34947 590 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 GLRXP35754 106 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 CENPAP49450 140 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 PPOXP50336 477 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 ATP5J2P56134 94 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 HGFACQ04756 655 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 ADIPOQQ15848 244 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SLC36A3Q495N2 470 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 Q5PR19 223 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SLC27A4Q6P1M0 643 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 ZFP1Q6P2D0 407 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 TMEM179BQ7Z7N9 219 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 TGIF2LYQ8IUE0 185 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SVOPLQ8N434 492 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 NPEPL1Q8NDH3 523 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 SDR9C7Q8NEX9 313 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 OR52E2Q8NGJ4 325 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 OR2T4Q8NH00 348 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 IPCEF1Q8WWN9 437 aaPredicted RBP10.25□□□□□ -0.77
VPS52-213ENST00000461743 HTRA1Q92743 480 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 FBXO17Q96EF6 278 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 PERPQ96FX8 193 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 OSBPL10Q9BXB5 764 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 NTN4Q9HB63 628 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 RPRD1BQ9NQG5 326 aaKnown RBP10.25□□□□□ -0.77
VPS52-213ENST00000461743 CMC2Q9NRP2 79 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 REV1Q9UBZ9 1251 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 B9D1Q9UPM9 204 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 COA3Q9Y2R0 106 aaPredicted RBP10.25□□□□□ -0.77
VPS52-213ENST00000461743 CMAHPQ9Y471 501 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 PMF1-BGLAPU3KQ54 211 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
VPS52-213ENST00000461743 ACANP16112 2415 aa10.25□□□□□ -0.77
VPS52-213ENST00000461743 CR1P17927 2039 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 MAGEA13PA6NCF6 341 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms