RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SPATS1Q496A3 300 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 ZNF774Q6NX45 483 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 ICA1LQ8NDH6 482 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 OR1J1Q8NGS3 322 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
LSM5-204ENST00000409909 IL1RAPQ9NPH3 570 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 NDE1Q9NXR1 346 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 AURKCQ9UQB9 309 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 IER3IP1Q9Y5U9 82 aa15.15■□□□□ 0.02
LSM5-204ENST00000409909 B2RBV5 119 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 SOCS2O14508 198 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 NCR1O76036 304 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 FABP3P05413 133 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 TACSTD2P09758 323 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 IL2RGP31785 369 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 GZMKP49863 264 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 GDI2P50395 445 aaKnown RBP15.14■□□□□ 0.01
LSM5-204ENST00000409909 SMIM11AP58511 58 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 PCBD1P61457 104 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 TRIP10Q15642 601 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 NKPD1Q17RQ9 610 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 TMEM255AQ5JRV8 349 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 OTPQ5XKR4 325 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 GPR139Q6DWJ6 353 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 SMARCD3Q6STE5 483 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 DPY19L2P2Q6ZN68 376 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 PTCHD4Q6ZW05 846 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 NDEL1Q9GZM8 345 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 SYT4Q9H2B2 425 aa15.14■□□□□ 0.01
LSM5-204ENST00000409909 VSX1Q9NZR4 365 aaPredicted RBP15.14■□□□□ 0.01
LSM5-204ENST00000409909 C12orf71A8MTZ7 269 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 SLC16A7O60669 478 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 MPZL1O95297 269 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 TXNDC12O95881 172 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 NGFP01138 241 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 ATP6V1B2P21281 511 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 RRM2P31350 389 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 CDKN2AP42771 156 aaKnown RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 MAGEB1P43366 347 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 MNAT1P51948 309 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 SELENOVP59797 346 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 SPATA46Q5T0L3 261 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 CYP2R1Q6VVX0 501 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 SYT9Q86SS6 491 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 ALDH16A1Q8IZ83 802 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 GTF3AQ92664 365 aaKnown RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 YIPF5Q969M3 257 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 MARS2Q96GW9 593 aaKnown RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 NSL1Q96IY1 281 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 KRCC1Q9NPI7 259 aaPredicted RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 SLCO1C1Q9NYB5 712 aa15.13■□□□□ 0.01
LSM5-204ENST00000409909 COA3Q9Y2R0 106 aaPredicted RBP15.13■□□□□ 0.01
LSM5-204ENST00000409909 LOC100289279A0A1B0GTE1 492 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 C17orf100A8MU93 164 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 ICMTO60725 284 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 FAM107AO95990 144 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 IGHV3-13P01766 116 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 T-ENOLP0DO92 83 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 MPV17P39210 176 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 RFX4Q33E94 735 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 CHRFAM7AQ494W8 412 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 RFPL4BQ6ZWI9 263 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 ZDHHC21Q8IVQ6 265 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 RDH5Q92781 318 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 SNX18Q96RF0 628 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 MDFIQ99750 246 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 NUAK2Q9H093 628 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 RERGLQ9H628 205 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 TMEM160Q9NX00 188 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 ACTR3BQ9P1U1 418 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 EIF3KQ9UBQ5 218 aaKnown RBP15.12■□□□□ 0.01
LSM5-204ENST00000409909 GPR160Q9UJ42 338 aa15.12■□□□□ 0.01
LSM5-204ENST00000409909 DYNC1I1O14576 645 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 OR10H3O60404 316 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 LMX1BO60663 402 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 KHDRBS3O75525 346 aaKnown RBP15.11■□□□□ 0.01
LSM5-204ENST00000409909 PPP1R3DO95685 299 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 FPR3P25089 353 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 GSSP48637 474 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 RPS6KA3P51812 740 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 CHN2P52757 468 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 CCL8P80075 99 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 GLO1Q04760 184 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 DBPQ10586 325 aaPredicted RBP15.11■□□□□ 0.01
LSM5-204ENST00000409909 TMEM154Q6P9G4 183 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 RINLQ6ZS11 566 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 ADCK1Q86TW2 530 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 GLB1L2Q8IW92 636 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 ABHD4Q8TB40 342 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 FANK1Q8TC84 345 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 KLF14Q8TD94 323 aaPredicted RBP15.11■□□□□ 0.01
LSM5-204ENST00000409909 TSSK2Q96PF2 358 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
LSM5-204ENST00000409909 WACQ9BTA9 647 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 OR52D1Q9H346 318 aa15.11■□□□□ 0.01
LSM5-204ENST00000409909 CHODLQ9H9P2 273 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms