RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NPAS1Q99742 590 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ABHD6Q9BV23 337 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ANGPTL4Q9BY76 406 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 AKIRIN1Q9H9L7 192 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 PLEKHA1Q9HB21 404 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF275Q9NSD4 429 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 NLKQ9UBE8 527 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 HS3ST3B1Q9Y662 390 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 R4GMQ9 66 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF462Q96JM2 2506 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 LOC102725191A0A1B0GVB3 256 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 H3BML4 177 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 EFNA2O43921 213 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 GPANK1O95872 356 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ECDO95905 644 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CD2P06729 351 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 DCTDP32321 178 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SOX2P48431 317 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 RAB25P57735 213 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 THEM4Q5T1C6 240 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 DCAF12Q5T6F0 453 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 PLCZ1Q86YW0 608 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CMTM4Q8IZR5 234 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 OR10H5Q8NGA6 315 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 NTNG2Q96CW9 530 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 DPAGT1Q9H3H5 408 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 LIN7BQ9HAP6 207 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ANKRD10Q9NXR5 420 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ITGB1BP2Q9UKP3 347 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 FOXJ3Q9UPW0 622 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 DHDHQ9UQ10 334 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 LRP12Q9Y561 859 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 NUBP2Q9Y5Y2 271 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 COL27A1Q8IZC6 1860 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 NSG1A0A0A6YYJ2 146 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 NAP1L6A6NFF2 107 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 INMT-MINDY4F8WBC2 141 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 GABARAPH6UMI1 98 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 C1QL1O75973 258 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 DHFRP00374 187 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ICAM2P13598 275 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 CD59P13987 128 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 FSTP19883 344 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ACHEP22303 614 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 RPS27P42677 84 aaKnown RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ART1P52961 327 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 BIDP55957 195 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 AP3S2P59780 193 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC35A1P78382 337 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 KCNJ8Q15842 424 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ETFDHQ16134 617 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 TATDN3Q17R31 274 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 TBRG1Q3YBR2 411 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC36A2Q495M3 483 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC22A10Q63ZE4 541 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 TIGD3Q6B0B8 471 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 NHLRC1Q6VVB1 395 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF704Q6ZNC4 412 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 FCRLAQ7L513 359 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 GLB1L2Q8IW92 636 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 UBE2J2Q8N2K1 259 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 GTPBP8Q8N3Z3 284 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 WDSUB1Q8N9V3 476 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 NOXO1Q8NFA2 376 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 PAQR8Q8TEZ7 354 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 DEDD2Q8WXF8 326 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 MIB2Q96AX9 1013 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 HAVCR1Q96D42 359 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC25A38Q96DW6 304 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 OXGR1Q96P68 337 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 STRADBQ9C0K7 418 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 OR2B2Q9GZK3 357 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 NEK6Q9HC98 313 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 B3GAT1Q9P2W7 334 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 CKLFQ9UBR5 152 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 STEAP1Q9UHE8 339 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 ING1Q9UK53 422 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 HRH3Q9Y5N1 445 aa9.36□□□□□ -0.91
POLR2J3-201ENST00000379340 A0A0B4J203 849 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 A0A0B4J293 547 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 AQP7P3A6NL99 342 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 LANCL1O43813 399 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 PMS2P2O95744 297 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 IGHG1P01857 330 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ISG15P05161 165 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF17P17021 662 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 ADRA2CP18825 462 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 LAP3P28838 519 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 P2RY4P51582 365 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 CAPZA1P52907 286 aa9.35□□□□□ -0.91
POLR2J3-201ENST00000379340 RAG2P55895 527 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms